RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SNRNP40Q96DI7 357 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 MS4A3Q96HJ5 214 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 C12orf49Q9H741 205 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 A0A1B0GV72 72 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 ZNF716A6NP11 495 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 RBFOX2O43251 390 aaKnown RBP eCLIP5.34□□□□□ -1.551e-12■■□□□ 13.4
PRPF4B-205ENST00000480058 S1PR2O95136 353 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 RCC1P18754 421 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 ZNF880Q6PDB4 577 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 ZAR1Q86SH2 424 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 BLNKQ8WV28 456 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 C5orf66Q9H5L9 145 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 TRAV34A0A0B4J273 112 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 OR2W5A6NFC9 320 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 ZNF785A8K8V0 405 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 H0Y8G0 127 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 LIFP15018 202 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 EFNB1P98172 346 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 SAPCD1Q5SSQ6 148 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 OR8I2Q8N0Y5 310 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 OR10AG1Q8NH19 301 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 RBKSQ9H477 322 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 IL17BQ9UHF5 180 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 JPT1Q9UK76 154 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 PAM16Q9Y3D7 125 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 SPTBN2O15020 2390 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 SMCHD1A6NHR9 2005 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 RHBDL1O75783 438 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 TRGC1P0CF51 173 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 FAM157BP0CG42 384 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 ACP1P24666 158 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 CTSSP25774 331 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 DUSP2Q05923 314 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 CACNG8Q8WXS5 425 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 LAMA4Q16363 1823 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 ADAMTS7Q9UKP4 1686 aa5.34□□□□□ -1.55
PRPF4B-205ENST00000480058 DNASE2O00115 360 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 PCP4P48539 62 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 ARL6IP6Q8N6S5 226 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 OR10AD1Q8NGE0 317 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 MYOZ3Q8TDC0 251 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 RGPD8O14715 1765 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 ALS2Q96Q42 1657 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 RGPD5Q99666 1765 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 H3BMH7 237 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 GNG7O60262 68 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 FHITP49789 147 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 JOSD1Q15040 202 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 IBA57Q5T440 356 aaKnown RBP5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 C16orf82Q7Z2V1 217 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 VN1R17PQ8TDU5 208 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 ZNF430Q9H8G1 570 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 RPRMQ9NS64 109 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 AP5S1Q9NUS5 200 aa5.34□□□□□ -1.56
PRPF4B-205ENST00000480058 MS4A18H0YCH9 400 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RPL7P18124 248 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 MAS1LP35410 378 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 SRSF9Q13242 221 aaKnown RBP eCLIP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 MS4A18Q3C1V0 323 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PXMP4Q9Y6I8 212 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 CACNA1DQ01668 2161 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RNF222A6NCQ9 220 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 KIR2DL1P43626 348 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 FUT5Q11128 374 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 IZUMO4Q1ZYL8 232 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 ZNF362Q5T0B9 420 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 MRPL54Q6P161 138 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PRSS41Q7RTY9 318 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 OR10S1Q8NGN2 331 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 OR4X1Q8NH49 305 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 SP7Q8TDD2 431 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PAXXQ9BUH6 204 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RAB1BQ9H0U4 201 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RALYQ9UKM9 306 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 TNFSF11O14788 317 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 MPV17P39210 176 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 STARD6P59095 220 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 TNFAIP6P98066 277 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RELBQ01201 579 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 AESQ08117 197 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 HERPUD1Q15011 391 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 MRGPRDQ8TDS7 321 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 GNRHR2Q96P88 292 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PARD6GQ9BYG4 376 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 SERGEFQ9UGK8 458 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 CACNA1EQ15878 2313 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 MYOGP15173 224 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RPL27AP46776 148 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PLP1P60201 277 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 TMEM187Q14656 261 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 DNM1P46Q6ZS02 220 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 UBALD1Q8TB05 177 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RCC1LQ96I51 464 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 RASL11BQ9BPW5 248 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 LINC00470Q9BZP3 86 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 FAM206AQ9NX38 181 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms