RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 KCTD7Q96MP8 289 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 CST11Q9H112 138 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 CHMP1AQ9HD42 196 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 PARP11Q9NR21 331 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 ZNF107Q9UII5 783 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 SOCS1O15524 211 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 LANCL1O43813 399 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 VDAC1P21796 283 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 ACTBP60709 375 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 RPS27AP62979 156 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 CFHR3Q02985 330 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 Q3ZCU0 254 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 HSD17B12Q53GQ0 312 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 GLT8D1Q68CQ7 371 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 TRAT1Q6PIZ9 186 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 DPF1Q92782 380 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 PRR25Q96S07 402 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 KLK15Q9H2R5 256 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 JPT1Q9UK76 154 aa13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 AK6Q9Y3D8 172 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-216ENST00000479525 TXNL1O43396 289 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 DUS4LO95620 317 aaKnown RBP13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 BLVRBP30043 206 aaPredicted RBP13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 MAP2K4P45985 399 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 CLDN12P56749 244 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 PLA2G7Q13093 441 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 SPHARQ15513 63 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 HMGN3Q15651 99 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 FAM131AQ6UXB0 335 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 SVOPQ8N4V2 548 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 COMMD1Q8N668 190 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 ABHD14BQ96IU4 210 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 ANKRD60Q9BZ19 345 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 GNB4Q9HAV0 340 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 OR1A1Q9P1Q5 309 aa13.58□□□□□ -0.23
ECHDC1-216ENST00000479525 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 SRMP19623 302 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 LINC00205P59089 165 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 QRFPP83859 136 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 NDPQ00604 133 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 FOXE3Q13461 319 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 C1orf100Q5SVJ3 147 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 TMEM91Q6ZNR0 172 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 GALMQ96C23 342 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 CCDC90BQ9GZT6 254 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 IFI27L2Q9H2X8 130 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 VCXQ9H320 206 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 RAB9BQ9NP90 201 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 AK3Q9UIJ7 227 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 A3GALT2U3KPV4 340 aa13.58□□□□□ -0.24
ECHDC1-216ENST00000479525 TMEM14DPA8MWL7 114 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 YPEL1O60688 119 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 CA11O75493 328 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 GLAP06280 429 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 IRF3Q14653 427 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 ECSCRQ19T08 205 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 ZNF833PQ6ZTB9 187 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 MS4A15Q8N5U1 240 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 OR2AK2Q8NG84 335 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 UFD1Q92890 307 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 YPEL2Q96QA6 119 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 ZNF251Q9BRH9 671 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 ALX4Q9H161 411 aaPredicted RBP13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 LPAR5Q9H1C0 372 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 PLGRKTQ9HBL7 147 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 SCN3BQ9NY72 215 aa13.57□□□□□ -0.24
ECHDC1-216ENST00000479525 IGHV7-81A0A0B4J1V7 117 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 SLC22A1O15245 554 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 NBR2O15453 112 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 IGHG4P01861 327 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 ELANEP08246 267 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 UCHL1P09936 223 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 UBBP0CG47 229 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 HTD2P86397 168 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 CD69Q07108 199 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 TMEM30BQ3MIR4 351 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 DRAXINQ8NBI3 349 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 KCNG3Q8TAE7 436 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 CLCC1Q96S66 551 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 TM2D1Q9BX74 207 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 FBXL15Q9H469 300 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 PLEKHJ1Q9NW61 149 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 GHRLQ9UBU3 117 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 SLC23A1Q9UHI7 598 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 RNF150Q9ULK6 438 aa13.56□□□□□ -0.24
ECHDC1-216ENST00000479525 NAPSAO96009 420 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 PSMB8P28062 276 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 VEGFCP49767 419 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 GNB1P62873 340 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 OR8H1Q8NGG4 311 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 THRSPQ92748 146 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 FAM103A1Q9BTL3 118 aaKnown RBP13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 ABRACLQ9P1F3 81 aa13.55□□□□□ -0.24
ECHDC1-216ENST00000479525 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 FCN1O00602 326 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms