RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 RANBP3Q9H6Z4 567 aaPredicted RBP16.47■□□□□ 0.23
VARS-224ENST00000479051 CLPSL1A2RUU4 121 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 TIMM23O14925 209 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 SLC31A2O15432 143 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 TSPAN9O75954 239 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 GNG2P59768 71 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 HACD4Q5VWC8 232 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 Q6ZSV7 163 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 C5orf24Q7Z6I8 188 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 LYG1Q8N1E2 194 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 SLC25A38Q96DW6 304 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 SLC23A1Q9UHI7 598 aa16.46■□□□□ 0.23
VARS-224ENST00000479051 A0A1W2PPI3 338 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 CHST1O43916 411 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 DTYMKP23919 212 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 RORCP51449 518 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 ZNF134P52741 427 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 ZNF137PP52743 207 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 SRSF7Q16629 238 aaKnown RBP eCLIP16.45■□□□□ 0.22
VARS-224ENST00000479051 PNLIPRP3Q17RR3 467 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 UBE2NLQ5JXB2 153 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 CCBE1Q6UXH8 406 aaPredicted RBP16.45■□□□□ 0.22
VARS-224ENST00000479051 MOB3BQ86TA1 216 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 THNSL2Q86YJ6 484 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 TGIF2LXQ8IUE1 241 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 DRAM1Q8N682 238 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 OR4A4PQ8NGN8 299 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 OR56B4Q8NH76 319 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 EDARADDQ8WWZ3 215 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 NAA50Q9GZZ1 169 aaKnown RBP16.45■□□□□ 0.22
VARS-224ENST00000479051 C16orf95Q9H693 158 aa16.45■□□□□ 0.22
VARS-224ENST00000479051 STAB1Q9NY15 2570 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 IGHV1-3A0A0C4DH29 117 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 FABP7O15540 132 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 SCTP09683 121 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 CD24P25063 80 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 RPL5P46777 297 aaKnown RBP16.44■□□□□ 0.22
VARS-224ENST00000479051 REG1BP48304 166 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 DIAPH2-AS1Q14236 149 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 HES1Q14469 280 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 CTF1Q16619 201 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 LINC01006Q8NI28 216 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 RTN4IP1Q8WWV3 396 aaPredicted RBP16.44■□□□□ 0.22
VARS-224ENST00000479051 ST6GALNAC6Q969X2 333 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 S100A16Q96FQ6 103 aaKnown RBP16.44■□□□□ 0.22
VARS-224ENST00000479051 SCOCQ9UIL1 159 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 RNF114Q9Y508 228 aa16.44■□□□□ 0.22
VARS-224ENST00000479051 TRAV18A0A075B6X5 111 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 TMEM235A6NFC5 223 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 ITGB1BP1O14713 200 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 NOL3O60936 208 aaKnown RBP16.43■□□□□ 0.22
VARS-224ENST00000479051 DIRAS3O95661 229 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 CEACAM6P40199 344 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 ZNF260Q3ZCT1 412 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 SAMD12Q8N8I0 201 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 OR2T6Q8NHC8 308 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 ACOT12Q8WYK0 555 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 AP3S1Q92572 193 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 SLC25A33Q9BSK2 321 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 ZNF747Q9BV97 191 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 ABCG5Q9H222 651 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 DCSTAMPQ9H295 470 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 GHITMQ9H3K2 345 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 PIPOXQ9P0Z9 390 aa16.43■□□□□ 0.22
VARS-224ENST00000479051 FAM90A9PA6NNJ1 464 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 HAX1O00165 279 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 LANCL1O43813 399 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 OR2F2O95006 317 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 SNRNP70P08621 437 aaKnown RBP16.42■□□□□ 0.22
VARS-224ENST00000479051 ARSJQ5FYB0 599 aaPredicted RBP16.42■□□□□ 0.22
VARS-224ENST00000479051 C11orf88Q6PI97 169 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 Q6ZS49 121 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 CLVS1Q8IUQ0 354 aaPredicted RBP16.42■□□□□ 0.22
VARS-224ENST00000479051 RAB2BQ8WUD1 216 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 CFHR4Q92496 578 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 RBM14Q96PK6 669 aaKnown RBP16.42■□□□□ 0.22
VARS-224ENST00000479051 PRSS22Q9GZN4 317 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 OR1A1Q9P1Q5 309 aa16.42■□□□□ 0.22
VARS-224ENST00000479051 ZNF230Q9UIE0 474 aaPredicted RBP16.42■□□□□ 0.22
VARS-224ENST00000479051 M0QZK8 103 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 TMEM11P17152 192 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 HABP2Q14520 560 aaPredicted RBP16.41■□□□□ 0.22
VARS-224ENST00000479051 FAM71F2Q6NXP2 309 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 MZT2AQ6P582 158 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 SHISA2Q6UWI4 295 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 OR10J5Q8NHC4 309 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 NUDCD2Q8WVJ2 157 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 MAFIPQ8WZ33 124 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 S1PR3Q99500 378 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 BCL7BQ9BQE9 202 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 CABLES2Q9BTV7 478 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 ST6GALNAC5Q9BVH7 336 aa16.41■□□□□ 0.22
VARS-224ENST00000479051 ELF5Q9UKW6 265 aaPredicted RBP16.41■□□□□ 0.22
VARS-224ENST00000479051 RAB29O14966 203 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 BET1O15155 118 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 ST8SIA5O15466 376 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 XRCC3O43542 346 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 IGKV1D-33P01593 117 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 IGKV1-33P01594 117 aa16.4■□□□□ 0.22
VARS-224ENST00000479051 GSTT2P0CG29 244 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms