RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 TMEM11P17152 192 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 PPP1CCP36873 323 aaKnown RBP12.53□□□□□ -0.4
GARNL3-215ENST00000478702 VEGFCP49767 419 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 ZNF134P52741 427 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 PLA2G7Q13093 441 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 HES1Q14469 280 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 C2orf76Q3KRA6 126 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 ABCA11PQ4W5N1 156 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 MORN2Q502X0 79 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 CT45A1Q5HYN5 189 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 NR2C2APQ86WQ0 139 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 OR4F17Q8NGA8 305 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 CT45A3Q8NHU0 189 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 GALMQ96C23 342 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-215ENST00000478702 ABHD14AQ9BUJ0 271 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-215ENST00000478702 C12orf4Q9NQ89 552 aa12.53□□□□□ -0.4
GARNL3-215ENST00000478702 TXNL4BQ9NX01 149 aaKnown RBP12.53□□□□□ -0.4
GARNL3-215ENST00000478702 K7EIL1 84 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 IGLL1P15814 213 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 TMEM50BP56557 158 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 EBI3Q14213 229 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 LY6G6FQ5SQ64 297 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 STEAP3Q658P3 488 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 MOB3BQ86TA1 216 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 Q8N6K4 173 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 PECRQ9BY49 303 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 RIMS4Q9H426 269 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-215ENST00000478702 ABRACLQ9P1F3 81 aa12.52□□□□□ -0.41
GARNL3-215ENST00000478702 SH2D7A6NKC9 451 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-215ENST00000478702 FGF16O43320 207 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 YPEL1O60688 119 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 PEX14O75381 377 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 RGS11O94810 467 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 LPLP06858 475 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 HLA-DRB3P79483 266 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 PLAC9Q5JTB6 97 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 YPEL2Q96QA6 119 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 RAB22AQ9UL26 194 aa12.51□□□□□ -0.41
GARNL3-215ENST00000478702 IGHV3-72A0A0B4J1Y9 119 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 A0A0B4J203 849 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 SMIM30A4D0T7 59 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 LANCL1O43813 399 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 RAB6AP20340 208 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 CD1BP29016 333 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 NEDD8Q15843 81 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 ODF3L1Q8IXM7 274 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 SETD6Q8TBK2 473 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 IL1F10Q8WWZ1 152 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 EAF1Q96JC9 268 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-215ENST00000478702 IFI27L2Q9H2X8 130 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.5□□□□□ -0.41
GARNL3-215ENST00000478702 MGAT4AQ9UM21 535 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 SSR3Q9UNL2 185 aa12.5□□□□□ -0.41
GARNL3-215ENST00000478702 NOTOA8MTQ0 251 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 MFNGO00587 321 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 HNF4GQ14541 408 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 MOGAT2Q3SYC2 334 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 OR2AK2Q8NG84 335 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 OR2T10Q8NGZ9 312 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 PTX4Q96A99 478 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
GARNL3-215ENST00000478702 OR51E2Q9H255 320 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 Q9N2K0 584 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 TENM3Q9P273 2699 aa12.49□□□□□ -0.41
GARNL3-215ENST00000478702 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 RAB27BO00194 218 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 MOSP00540 346 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-215ENST00000478702 SLC2A2P11168 524 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-215ENST00000478702 CD33P20138 364 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 GADD45AP24522 165 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 CD83Q01151 205 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 LSAMPQ13449 338 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 C9orf152Q5JTZ5 239 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 ZNF833PQ6ZTB9 187 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 OR10R2Q8NGX6 335 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 CHCHD6Q9BRQ6 235 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 MRPL20Q9BYC9 149 aaKnown RBP12.48□□□□□ -0.41
GARNL3-215ENST00000478702 KCNK7Q9Y2U2 307 aa12.48□□□□□ -0.41
GARNL3-215ENST00000478702 WI2-2373I1.2A0A1W2PRP0 233 aa12.47□□□□□ -0.41
GARNL3-215ENST00000478702 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
GARNL3-215ENST00000478702 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-215ENST00000478702 ITGB1BP1O14713 200 aa12.47□□□□□ -0.41
GARNL3-215ENST00000478702 HIST1H1DP16402 221 aaKnown RBP12.47□□□□□ -0.41
GARNL3-215ENST00000478702 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
GARNL3-215ENST00000478702 FAM71F2Q6NXP2 309 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms