RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 COL5A1-AS1Q5SY13 56 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 Q6ZPA2 131 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 DTX1Q86Y01 620 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 WDYHV1Q96HA8 205 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 ASCL3Q9NQ33 180 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 CTXND1A0A1B0GTU2 59 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 SLC22A20A6NK97 555 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 SHISA8B8ZZ34 492 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 JMJD7P0C870 316 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 IRF2P14316 349 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 CLDN17P56750 224 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 TPPP2P59282 170 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 CHODLQ9H9P2 273 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 PLEK2Q9NYT0 353 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 KLRF1Q9NZS2 232 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 TRAPPC1Q9Y5R8 145 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 KIAA1324LA8MWY0 1029 aaPredicted RBP13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 NRASP01111 189 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 UMODP07911 640 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 CD59P13987 128 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 CRYGSP22914 178 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 SNAI3Q3KNW1 292 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM144Q7Z5S9 345 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 NEIL1Q96FI4 390 aaPredicted RBP13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 OR2J1Q9GZK6 312 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM106BQ9NUM4 274 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 ZFP30Q9Y2G7 519 aa13.03□□□□□ -0.32
CLSTN1-205ENST00000477264 GPR179Q6PRD1 2367 aa13.02□□□□□ -0.32
CLSTN1-205ENST00000477264 A6NNC1 897 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 SYNGR2O43760 224 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 TIAF1O95411 115 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 ESDP10768 282 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 F2RP25116 425 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 IL3RAP26951 378 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 RPS18P62269 152 aaKnown RBP13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 PRSS58Q8IYP2 241 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 CMTM2Q8TAZ6 248 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 STRADBQ9C0K7 418 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 PSENENQ9NZ42 101 aa13.02□□□□□ -0.33
CLSTN1-205ENST00000477264 A0A1W2PNR3 127 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 H3BP45 60 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 YPEL1O60688 119 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 CLDN15P56746 228 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 TOMM20LQ6UXN7 152 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 TAF15Q92804 592 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 EXTL1Q92935 676 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 GPR146Q96CH1 333 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 YPEL2Q96QA6 119 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 FER1L5A0AVI2 2057 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 ZNF814B7Z6K7 855 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 MLNRO43193 412 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 DHHO43323 396 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 NXPH3O95157 252 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 CD82P27701 267 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 RTP5Q14D33 572 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 Q8NFD4 153 aa13.01□□□□□ -0.33
CLSTN1-205ENST00000477264 PGLYRP1O75594 196 aaPredicted RBP13□□□□□ -0.33
CLSTN1-205ENST00000477264 NAPSAO96009 420 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 SELENOTP62341 195 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 FOXL1Q12952 345 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 COTL1Q14019 142 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 BRICD5Q6PL45 260 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 NEK7Q8TDX7 302 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 DTD1Q8TEA8 209 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 VAMP8Q9BV40 100 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 OR6C6A6NF89 314 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 TMPRSS2O15393 492 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 OR7C1O76099 320 aaPredicted RBP13□□□□□ -0.33
CLSTN1-205ENST00000477264 SERPINE2P07093 398 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 CDCP2Q5VXM1 449 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 FBXW9Q5XUX1 488 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 NUFIP2Q7Z417 695 aaKnown RBP13□□□□□ -0.33
CLSTN1-205ENST00000477264 OR4F5Q8NH21 305 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 SDSLQ96GA7 329 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 OR4F4Q96R69 305 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 DIRC2Q96SL1 478 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 OR51B6Q9H340 312 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 KIAA1549Q9HCM3 1950 aa13□□□□□ -0.33
CLSTN1-205ENST00000477264 CACNA1HO95180 2353 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 IGKV1D-13A0A0B4J2D9 117 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 FAM90A26D6RGX4 464 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 SLC33A1O00400 549 aaPredicted RBP12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 VAMP5O95183 116 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 OPN1LWP04000 364 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 IGKV1-13P0DP09 117 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 SAPCD1Q5SSQ6 148 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 TPTE2P1Q5T6R2 138 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 FAM27BQ5VT28 67 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms