RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	MOB3B	Q86TA1	216 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	OR56B1	Q8NGI3	324 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	OR5H6	Q8NGV6	325 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	OR10R2	Q8NGX6	335 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	OR2T6	Q8NHC8	308 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	PTX4	Q96A99	478 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	GALM	Q96C23	342 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	EAF1	Q96JC9	268 aa	Predicted RBP	10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	AGMAT	Q9BSE5	352 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	RIMS4	Q9H426	269 aa	Predicted RBP	10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	OR1A1	Q9P1Q5	309 aa		10.85	□□□□□ -0.67
RAB5A-208	ENST00000476544	IGKV1D-8	A0A087WSZ0	117 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544		A0A087WXM4	84 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	LANCL1	O43813	399 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	IGKV1D-33	P01593	117 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	IGKV1-33	P01594	117 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	LPL	P06858	475 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	CD3G	P09693	182 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	VSIG10L2	P0DP72	767 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	CD28	P10747	220 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	OR3A3	P47888	321 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	MXD1	Q05195	221 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	TMEM30B	Q3MIR4	351 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	C10orf99	Q6UWK7	81 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	C16orf82	Q7Z2V1	217 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	RAB3C	Q96E17	227 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	KCTD7	Q96MP8	289 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	CMSS1	Q9BQ75	279 aa	Known RBP	10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	IFI27L2	Q9H2X8	130 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	DAPK2	Q9UIK4	370 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	JPT1	Q9UK76	154 aa		10.84	□□□□□ -0.67
RAB5A-208	ENST00000476544	WNK1	Q9H4A3	2382 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	LOC100506127	A0A0U1RQW1	187 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	SMIM18	P0DKX4	95 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	HIST1H1D	P16402	221 aa	Known RBP	10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	CD1B	P29016	333 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	F2RL1	P55085	397 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	LINC00205	P59089	165 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	CDNF	Q49AH0	187 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	SFXN4	Q6P4A7	337 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	LYG1	Q8N1E2	194 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	C5orf56	Q8N8D9	126 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	SETD6	Q8TBK2	473 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	IL1F10	Q8WWZ1	152 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	NABP2	Q9BQ15	211 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	CMYA5	Q8N3K9	4069 aa		10.83	□□□□□ -0.68
RAB5A-208	ENST00000476544	TRDC	B7Z8K6	153 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	TNFAIP8	O95379	198 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	TSPAN15	O95858	294 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	GSTT2	P0CG29	244 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	GSTT2B	P0CG30	244 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	RPS19	P39019	145 aa	Known RBP	10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	CEACAM6	P40199	344 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	TREML4	Q6UXN2	200 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	ZNF833P	Q6ZTB9	187 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	IZUMO1	Q8IYV9	350 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544		Q8N9W7	124 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	SLC25A38	Q96DW6	304 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	ABHD14A	Q9BUJ0	271 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	TOLLIP	Q9H0E2	274 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	RAB9B	Q9NP90	201 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	C12orf4	Q9NQ89	552 aa		10.82	□□□□□ -0.68
RAB5A-208	ENST00000476544	ITGB1BP1	O14713	200 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	ST8SIA5	O15466	376 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	SSX5	O60225	188 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	FCGR3A	P08637	254 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	CT45A6	P0DMU7	189 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	CT45A5	P0DMU8	189 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	CT45A7	P0DMV0	189 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	TMEM11	P17152	192 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	HLA-DRB3	P79483	266 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	CD83	Q01151	205 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	ZNF260	Q3ZCT1	412 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	IGSF11	Q5DX21	431 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	TGIF2LX	Q8IUE1	241 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	MAFIP	Q8WZ33	124 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	ABHD14B	Q96IU4	210 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	CITED2	Q99967	270 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	MRPL20	Q9BYC9	149 aa	Known RBP	10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	ATG5	Q9H1Y0	275 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	ABRACL	Q9P1F3	81 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	SLC23A1	Q9UHI7	598 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	RNF150	Q9ULK6	438 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	MOB4	Q9Y3A3	225 aa		10.81	□□□□□ -0.68
RAB5A-208	ENST00000476544	NOTCH1	P46531	2555 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	SAA2-SAA4	A0A096LPE2	208 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	RRP9	O43818	475 aa	Known RBP	10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	SAA2	P0DJI9	122 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	RANBP1	P43487	201 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	ARHGDIB	P52566	201 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	LSM3	P62310	102 aa	Known RBP	10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	LSAMP	Q13449	338 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	HES1	Q14469	280 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	RPL39P5	Q59GN2	51 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	MOB1B	Q7L9L4	216 aa		10.8	□□□□□ -0.68
RAB5A-208	ENST00000476544	DTX3	Q8N9I9	347 aa		10.8	□□□□□ -0.68

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