RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CST6Q15828 149 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 ACY3Q96HD9 319 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 C15orf41Q9Y2V0 281 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 DOCK6Q96HP0 2047 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 DSCAML1Q8TD84 2053 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 C1orf232A0A0U1RR37 186 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 C17orf98A8MV24 154 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 HIST1H1CP16403 213 aaKnown RBP2.68□□□□□ -1.98
VPS50-212ENST00000476413 FUSP35637 526 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS50-212ENST00000476413 ACTBP60709 375 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 ACTG1P63261 375 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 MAPK14Q16539 360 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 DNAL1Q4LDG9 190 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 DNM1P34Q6PK57 102 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 OR51H1Q8NH63 302 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 GLS2Q9UI32 602 aa2.68□□□□□ -1.98
VPS50-212ENST00000476413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS50-212ENST00000476413 ZNF638Q14966 1978 aaKnown RBP2.68□□□□□ -1.98
VPS50-212ENST00000476413 LOC102725191A0A1B0GVB3 256 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 TINCRA0A1B0GVN0 87 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 C3orf84H3BNL1 204 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 AZIN1O14977 448 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 HPGDSO60760 199 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 OR13C7P0DN81 318 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 IGHV3-30-3P0DP02 117 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 CDK2P24941 298 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 PDK2Q15119 407 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 FAM229BQ4G0N7 80 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 SCGB1D4Q6XE38 83 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 SDIM1Q6ZPB5 146 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 PLCZ1Q86YW0 608 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 MFSD8Q8NHS3 518 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
VPS50-212ENST00000476413 UPK3BQ9BT76 320 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 HDHD2Q9H0R4 259 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 C16orf95Q9H693 158 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 ATP6V1DQ9Y5K8 247 aa2.67□□□□□ -1.98
VPS50-212ENST00000476413 A8MWP6 167 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 ZNF73O43830 326 aaPredicted RBP2.66□□□□□ -1.98
VPS50-212ENST00000476413 CRYGDP07320 174 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 CD99P14209 185 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 HSPA9P38646 679 aaKnown RBP2.66□□□□□ -1.98
VPS50-212ENST00000476413 OR1E2P47887 323 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 FGF12P61328 243 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 DAD1P61803 113 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 PSG4Q00888 419 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 MGAT3Q09327 533 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 TMPPEQ6ZT21 453 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 TCF24Q7RTU0 167 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 FAM19A5Q7Z5A7 132 aaPredicted RBP2.66□□□□□ -1.98
VPS50-212ENST00000476413 KRTAP13-1Q8IUC0 172 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 MED18Q9BUE0 208 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 MROQ9BYG7 248 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 SLC22A4Q9H015 551 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 MS4A6AQ9H2W1 248 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 PLEKHJ1Q9NW61 149 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 MRPL16Q9NX20 251 aaKnown RBP2.66□□□□□ -1.98
VPS50-212ENST00000476413 SNX10Q9Y5X0 201 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 HSPE1-MOB4S4R3N1 261 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 NPATQ14207 1427 aa2.66□□□□□ -1.98
VPS50-212ENST00000476413 NLRC5Q86WI3 1866 aa2.65□□□□□ -1.98
VPS50-212ENST00000476413 TRPM6Q9BX84 2022 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 GOLGA8KD6RF30 607 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 G3V3Q6 166 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 GOLGA8MH3BSY2 632 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 BIRC5O15392 142 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 IGLV3-27P01718 113 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 HBZP02008 142 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 ATP5G1P05496 136 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 CFL1P23528 166 aaKnown RBP2.65□□□□□ -1.99
VPS50-212ENST00000476413 MIPP30301 263 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 GZMMP51124 257 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 DAPP51397 102 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 H2BFSP57053 126 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 FOXF1Q12946 379 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 MRPL51Q4U2R6 128 aaKnown RBP2.65□□□□□ -1.99
VPS50-212ENST00000476413 LCN8Q6JVE9 175 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 OR10D3Q8NH80 312 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 OR2V1Q8NHB1 315 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 SLC37A2Q8TED4 501 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 SMIM19Q96E16 107 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 MBOAT7Q96N66 472 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 C20orf166-AS1Q96NR2 134 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 MED28Q9H204 178 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 PARVAQ9NVD7 372 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 PSMD13Q9UNM6 376 aa2.65□□□□□ -1.99
VPS50-212ENST00000476413 F5H768 121 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 PPP1CCP36873 323 aaKnown RBP2.64□□□□□ -1.99
VPS50-212ENST00000476413 TPM4P67936 248 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 TMEM267Q0VDI3 215 aaPredicted RBP2.64□□□□□ -1.99
VPS50-212ENST00000476413 FAM9CQ8IZT9 166 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 TMEM156Q8N614 296 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 TMEM251Q8N6I4 163 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 ABHD14BQ96IU4 210 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 OR7D2Q96RA2 312 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 FIS1Q9Y3D6 152 aa2.64□□□□□ -1.99
VPS50-212ENST00000476413 OTOFQ9HC10 1997 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 DEDDO75618 318 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 TPM3P06753 285 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 CXCL2P19875 107 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms