RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR7C2O60412 319 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CBR3O75828 277 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 OR10J4P0C629 311 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 GCH1P30793 250 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF133P52736 654 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-204ENST00000476379 GNB1P62873 340 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 OR8G1Q15617 311 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 NCR3LG1Q68D85 454 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 RTL6Q6ICC9 239 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 H2BFWTQ7Z2G1 175 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF561Q8N587 486 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF610Q8N9Z0 462 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 OR6X1Q8NH79 312 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CT55Q8WUE5 264 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 MVB12AQ96EY5 273 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ACY3Q96HD9 319 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CHST5Q9GZS9 411 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 PINLYPA6NC86 204 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 TSTD3H0UI37 97 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 M0R1X1 148 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 SSTR5P35346 364 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 RAB5CP51148 216 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 PCOLCEQ15113 449 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CPEB3Q8NE35 698 aaKnown RBP4.28□□□□□ -1.72
CCDC39-204ENST00000476379 GTF3AQ92664 365 aaKnown RBP4.28□□□□□ -1.72
CCDC39-204ENST00000476379 MALSU1Q96EH3 234 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 SIGLEC12Q96PQ1 595 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 PIMREGQ9BSJ6 248 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ELOVL1Q9BW60 279 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CLCF1Q9UBD9 225 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 BOKQ9UMX3 212 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-204ENST00000476379 NPTNQ9Y639 398 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 XKRY2A2RUG3 117 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 GJE1A6NN92 205 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CLEC3BP05452 202 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 GATA2P23769 480 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 DSCR4P56555 118 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ENDOGQ14249 297 aaKnown RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 MPPED2Q15777 294 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 OR1L1Q8NH94 360 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PP6455Q8WZ26 134 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 TTC9Q92623 222 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 RNF166Q96A37 237 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 IMMP2LQ96T52 175 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ATP5SQ99766 215 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PCGF1Q9BSM1 259 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 SEC11CQ9BY50 192 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 OR2H1Q9GZK4 316 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PAM16Q9Y3D7 125 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 HDGFL3Q9Y3E1 203 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CXorf51AA0A1B0GTR3 108 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 M0R1B8 84 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 DEDDO75618 318 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PAX6P26367 422 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 NTF4P34130 210 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 THBS4P35443 961 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 HTD2P86397 168 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 SLC38A11Q08AI6 406 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 RNF151Q2KHN1 245 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 RNF212Q495C1 297 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 FNDC7Q5VTL7 733 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ABLIM2Q6H8Q1 611 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 TOMM20LQ6UXN7 152 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 NUFIP2Q7Z417 695 aaKnown RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 RABEPKQ7Z6M1 372 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 FAM58AQ8N1B3 248 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 NMES1Q9C002 83 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF737O75373 536 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 IGLV3-19P01714 112 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 LIFP15018 202 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CAMPP49913 170 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 HABP2Q14520 560 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ARL6IP1Q15041 203 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 MRPL54Q6P161 138 aaKnown RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ARHGEF39Q8N4T4 335 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 POC1AQ8NBT0 407 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CMTM3Q96MX0 182 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 STRADBQ9C0K7 418 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 RBKSQ9H477 322 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 GSN-AS1Q9NRJ2 163 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 RPRMQ9NS64 109 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 DEPPQ9NTK1 212 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CBLN4Q9NTU7 201 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ZDHHC8Q9ULC8 765 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 A0A087X0M5 115 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 A0A1B0GX30 115 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 AP4M1O00189 453 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 MT-ND4LP03901 98 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CXCL1P09341 107 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 SELLP14151 372 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 WNT5AP41221 380 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 FUT6P51993 359 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 DLX1P56177 255 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PCBD1P61457 104 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 EIF3IQ13347 325 aaKnown RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 FXYD3Q14802 87 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms