RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 HTD2P86397 168 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 NDPQ00604 133 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 CD69Q07108 199 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 UNC119Q13432 240 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 CXorf66Q5JRM2 361 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 C6orf183Q5T699 404 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF833PQ6ZTB9 187 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 AHSA2Q719I0 299 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 C6orf201Q7Z4U5 140 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 PACRGLQ8N7B6 248 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF491Q8N8L2 437 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 MINDY2Q8NBR6 621 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 SETD9Q8NE22 299 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 BPIFB6Q8NFQ5 453 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 NPBQ8NG41 125 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 OR11H1Q8NG94 326 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 OR8U1Q8NH10 309 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 C4orf3Q8WVX3 66 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 PRR25Q96S07 402 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 GFI1Q99684 422 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 NABP2Q9BQ15 211 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 UQCC2Q9BRT2 126 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 AGMATQ9BSE5 352 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 NICN1Q9BSH3 213 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 ABHD14AQ9BUJ0 271 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 MRPL20Q9BYC9 149 aaKnown RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 ANKRD60Q9BZ19 345 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 PARP12Q9H0J9 701 aaKnown RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 IFI27L2Q9H2X8 130 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 GNB4Q9HAV0 340 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 CHCHD3Q9NX63 227 aaKnown RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 CNOT2Q9NZN8 540 aaKnown RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF580Q9UK33 172 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 LSM2Q9Y333 95 aaKnown RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 FBXO7Q9Y3I1 522 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 SAA2-SAA4A0A096LPE2 208 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 ATP6V0E1O15342 81 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 TXNL1O43396 289 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 YPEL1O60688 119 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 NAPSAO96009 420 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 SAA2P0DJI9 122 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-207ENST00000475549 CT45A6P0DMU7 189 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 CT45A5P0DMU8 189 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 CT45A7P0DMV0 189 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 MYF6P23409 242 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 TAS2R43P59537 309 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 GNB1P62873 340 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 RPS27AP62979 156 aaKnown RBP5.45□□□□□ -1.54
HDAC3-207ENST00000475549 RCN1Q15293 331 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 MMDQ15546 238 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 HMGN3Q15651 99 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 ACSM3Q53FZ2 586 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 RPL39P5Q59GN2 51 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 C19orf54Q5BKX5 351 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 LY6G6FQ5SQ64 297 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 C1orf100Q5SVJ3 147 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 OGFRL1Q5TC84 451 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-207ENST00000475549 LIN54Q6MZP7 749 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF880Q6PDB4 577 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF554Q86TJ5 538 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 SVOPQ8N4V2 548 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 NKAIN3Q8N8D7 197 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 OR1N2Q8NGR9 330 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 CASTOR1Q8WTX7 329 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 UBE2E2Q96LR5 201 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 YPEL2Q96QA6 119 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 OR5B12Q96R08 314 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 GON7Q9BXV9 100 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 GPR61Q9BZJ8 451 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 ALX4Q9H161 411 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-207ENST00000475549 OR51J1Q9H342 316 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 TPSG1Q9NRR2 321 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 JPT1Q9UK76 154 aa5.45□□□□□ -1.54
HDAC3-207ENST00000475549 FOXI3A8MTJ6 420 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM14DPA8MWL7 114 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 SEC14L6B5MCN3 397 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 ANKRD65E5RJM6 399 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 PTGES3LE9PB15 166 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 MYL12BO14950 172 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 CASQ2O14958 399 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 SLC22A1O15245 554 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 NBR2O15453 112 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 ST8SIA5O15466 376 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 RRP9O43818 475 aaKnown RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 RAMP3O60896 148 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 NDUFA3O95167 84 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 HLA-DRB1P01911 266 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 CDK1P06493 297 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 SRMP19623 302 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 VDAC1P21796 283 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 BLVRBP30043 206 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 ECI1P42126 302 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 RAB9AP51151 201 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 MED21Q13503 144 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 IRF3Q14653 427 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 C5orf64Q2M2E5 130 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM30BQ3MIR4 351 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF260Q3ZCT1 412 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 RNLSQ5VYX0 342 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TRAT1Q6PIZ9 186 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms