RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ANKRD60Q9BZ19 345 aa13.78□□□□□ -0.2
PCGF3-209ENST00000475288 TOLLIPQ9H0E2 274 aa13.78□□□□□ -0.2
PCGF3-209ENST00000475288 TAF9BQ9HBM6 251 aa13.78□□□□□ -0.2
PCGF3-209ENST00000475288 PALMDQ9NP74 551 aa13.78□□□□□ -0.2
PCGF3-209ENST00000475288 OR2S2Q9NQN1 319 aa13.78□□□□□ -0.2
PCGF3-209ENST00000475288 BIRC6Q9NR09 4857 aa13.78□□□□□ -0.2
PCGF3-209ENST00000475288 A8MZ25 164 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 ARPC1BO15143 372 aaKnown RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 YPEL1O60688 119 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 LGALS1P09382 135 aaKnown RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 OR8U9P0C7N5 309 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 FSTP19883 344 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 BLVRBP30043 206 aaPredicted RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 ADARB1P78563 741 aaKnown RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 ZNF660Q6AZW8 331 aaPredicted RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 FAM71F2Q6NXP2 309 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 TMPRSS11AQ6ZMR5 421 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 OVCH2Q7RTZ1 564 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 PRR18Q8N4B5 295 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 RBMXL1Q96E39 390 aaKnown RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 RITA1Q96K30 269 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 RDH12Q96NR8 316 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 YPEL2Q96QA6 119 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 OR5B12Q96R08 314 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 MRPL20Q9BYC9 149 aaKnown RBP13.77□□□□□ -0.21
PCGF3-209ENST00000475288 VCX3BQ9H321 246 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 CKLFQ9UBR5 152 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 PEX16Q9Y5Y5 336 aa13.77□□□□□ -0.21
PCGF3-209ENST00000475288 LOC100130705A0A1B0GUX0 176 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 CNTFRP26992 372 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 DCKP27707 260 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 YIF1BQ5BJH7 314 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 PYHIN1Q6K0P9 492 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 PACRGLQ8N7B6 248 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 APH1BQ8WW43 257 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 KCNIP1Q9NZI2 227 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 KIAA1456Q9P272 454 aa13.76□□□□□ -0.21
PCGF3-209ENST00000475288 FOXA2Q9Y261 457 aaPredicted RBP13.76□□□□□ -0.21
PCGF3-209ENST00000475288 MAGEA13PA6NCF6 341 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 SOX15O60248 233 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 RGS11O94810 467 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 FUT3P21217 361 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 ETV1P50549 477 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 SLURP1P55000 103 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 Q499Y3 187 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 CD200R1LQ6Q8B3 271 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 GLIPR1L1Q6UWM5 242 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 LYPD6Q86Y78 171 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 C9orf16Q9BUW7 83 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 BABAM2Q9NXR7 383 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 LRRC42Q9Y546 428 aa13.75□□□□□ -0.21
PCGF3-209ENST00000475288 TRAV8-7A0A075B6U6 113 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 TRIM64CA6NLI5 447 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 LDLRAD4O15165 306 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 RPS11P62280 158 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCGF3-209ENST00000475288 NDPQ00604 133 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 GNMTQ14749 295 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 OR2G6Q5TZ20 316 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 DMKNQ6E0U4 476 aaPredicted RBP13.74□□□□□ -0.21
PCGF3-209ENST00000475288 MRPL30Q8TCC3 161 aaKnown RBP13.74□□□□□ -0.21
PCGF3-209ENST00000475288 NRG4Q8WWG1 115 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 ARPC1AQ92747 370 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 GHSRQ92847 366 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 MUL1Q969V5 352 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
PCGF3-209ENST00000475288 ORAI1Q96D31 301 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 Q96M66 194 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 ALX4Q9H161 411 aaPredicted RBP13.74□□□□□ -0.21
PCGF3-209ENST00000475288 EDA2RQ9HAV5 297 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 NUBP2Q9Y5Y2 271 aa13.74□□□□□ -0.21
PCGF3-209ENST00000475288 IGHV4OR15-8A0A075B7B6 117 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 A0A087WW49 117 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 A0A1W2PN81 502 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 IRGMA1A4Y4 181 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 HSPA12AO43301 675 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 HSPB1P04792 205 aaKnown RBP13.73□□□□□ -0.21
PCGF3-209ENST00000475288 MGMTP16455 207 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 CHRNA7P36544 502 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 PPP1CCP36873 323 aaKnown RBP13.73□□□□□ -0.21
PCGF3-209ENST00000475288 PITPNAQ00169 270 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
PCGF3-209ENST00000475288 C6orf141Q5SZD1 244 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 SIGIRRQ6IA17 410 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 OR52L2PQ8NGH6 319 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 OR13C5Q8NGS8 318 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 GALMQ96C23 342 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 VCXQ9H320 206 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 FBXO7Q9Y3I1 522 aa13.73□□□□□ -0.21
PCGF3-209ENST00000475288 SAA2-SAA4A0A096LPE2 208 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 TRBV5-7A0A0A0MS05 114 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 RRHO14718 337 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 PDCD6O75340 191 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 WBP4O75554 376 aaKnown RBP13.72□□□□□ -0.21
PCGF3-209ENST00000475288 SAA2P0DJI9 122 aaPredicted RBP13.72□□□□□ -0.21
PCGF3-209ENST00000475288 VEGFCP49767 419 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 ECSCRQ19T08 205 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 AKIRIN2Q53H80 203 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 AWAT2Q6E213 333 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 Q8N1Y9 231 aa13.72□□□□□ -0.21
PCGF3-209ENST00000475288 JAGN1Q8N5M9 183 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms