RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 OR4C46A6NHA9 309 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 BMPR1BO00238 502 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 EBAG9O00559 213 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 ORC5O43913 435 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 TRBV12-3P01733 135 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 TTRP02766 147 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 RPL35AP18077 110 aaKnown RBP5.84□□□□□ -1.47
USP54-211ENST00000474929 BTF3P20290 206 aaKnown RBP5.84□□□□□ -1.47
USP54-211ENST00000474929 CALB2P22676 271 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 PRKACBP22694 351 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 NPY1RP25929 384 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 CMC4P56277 68 aaPredicted RBP5.84□□□□□ -1.47
USP54-211ENST00000474929 ACTR3P61158 418 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 MS4A2Q01362 244 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 TMEM187Q14656 261 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 TMEM41BQ5BJD5 291 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 ATAD3CQ5T2N8 411 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 RSBN1Q5VWQ0 802 aaPredicted RBP5.84□□□□□ -1.47
USP54-211ENST00000474929 CDPF1Q6NVV7 123 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 FAM71F2Q6NXP2 309 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 SAXO1Q8IYX7 474 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 ADAD2Q8NCV1 583 aaKnown RBP5.84□□□□□ -1.47
USP54-211ENST00000474929 OR2T33Q8NG76 320 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 GNPDA2Q8TDQ7 276 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 ASB17Q8WXJ9 295 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 ARL11Q969Q4 196 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 RNF5Q99942 180 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 FBXL15Q9H469 300 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 NEK6Q9HC98 313 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 IL20Q9NYY1 176 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 GNG12Q9UBI6 72 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 GTF2A1LQ9UNN4 478 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 TMEM14AQ9Y6G1 99 aa5.84□□□□□ -1.47
USP54-211ENST00000474929 OR5H14A6NHG9 310 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 H0YJX3 145 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 HSPB6O14558 160 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 GYG2O15488 501 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 GGCTO75223 188 aaKnown RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 GADD45GO95257 159 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 FABP3P05413 133 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 OCM2P0CE71 109 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 OCMP0CE72 109 aaPredicted RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 CLUP10909 449 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 DBTP11182 482 aaKnown RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 ATP6V1B2P21281 511 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 CCL1P22362 96 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 ADARB1P78563 741 aaKnown RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 PPP1R8Q12972 351 aaKnown RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 PDZK1IP1Q13113 114 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 EXOSC2Q13868 293 aaKnown RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 C6orf141Q5SZD1 244 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 Q6P435 159 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 FAM131AQ6UXB0 335 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 DHFR2Q86XF0 187 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 ZNF679Q8IYX0 411 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 Q8NAQ8 132 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 GRPEL2Q8TAA5 225 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 CD300LFQ8TDQ1 290 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 SPSB1Q96BD6 273 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 CCDC124Q96CT7 223 aaKnown RBP5.83□□□□□ -1.48
USP54-211ENST00000474929 ALG8Q9BVK2 526 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
USP54-211ENST00000474929 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.82□□□□□ -1.48
USP54-211ENST00000474929 TMEM30CPA0ZSE6 113 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 DEFB4AO15263 64 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 PRODHO43272 600 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 SPINT2O43291 252 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 CA2P00918 260 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 SEMG1P04279 462 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 GSTT2P0CG29 244 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 GSTT2BP0CG30 244 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 MYOD1P15172 320 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 ALOX5APP20292 161 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 RRM2P31350 389 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 MC5RP33032 325 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 MTCP1P56278 107 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 ROM1Q03395 351 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 UBE2V2Q15819 145 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 MICAQ29983 383 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 FAM106AQ4KMX7 169 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 ZNF691Q5VV52 312 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 BTNL8Q6UX41 500 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 GPHB5Q86YW7 130 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 ELMOD2Q8IZ81 293 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 ARHGAP24Q8N264 748 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 TCEANCQ8N8B7 351 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 ZNF439Q8NDP4 499 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 FUZQ9BT04 418 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 MRPL20Q9BYC9 149 aaKnown RBP5.82□□□□□ -1.48
USP54-211ENST00000474929 CMC2Q9NRP2 79 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 COA4Q9NYJ1 87 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 RCC2Q9P258 522 aaKnown RBP5.82□□□□□ -1.48
USP54-211ENST00000474929 MLXQ9UH92 298 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 RRP15Q9Y3B9 282 aaKnown RBP5.82□□□□□ -1.48
USP54-211ENST00000474929 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
USP54-211ENST00000474929 NBDYA0A0U1RRE5 68 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 TCRBV5S2A0A599 114 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 ERICH4A6NGS2 130 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 TNFRSF11BO00300 401 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 TSPAN4O14817 238 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms