RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 C1orf100Q5SVJ3 147 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 FBLIM1Q8WUP2 373 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 MSL2Q9HCI7 577 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 NPVFQ9HCQ7 196 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 SLC2A9Q9NRM0 540 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 PATJQ8NI35 1801 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 H7BYZ3 331 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 MAGEB4O15481 346 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 DEDDO75618 318 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 CTAG2O75638 210 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 KLF7O75840 302 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 CLINT1Q14677 625 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 HLXQ14774 488 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 SRSF7Q16629 238 aaKnown RBP eCLIP3.96□□□□□ -1.781e-9■□□□□ 10.7
CCNL1-215ENST00000474539 GUK1Q16774 197 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF672Q499Z4 452 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 AVPI1Q5T686 147 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 C9orf106Q8NAJ2 232 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM52Q8NDY8 209 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 OR4P4Q8NGL7 312 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 OR5M8Q8NGP6 311 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 NUDCD2Q8WVJ2 157 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 MARC2Q969Z3 335 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 PHYHIPLQ96FC7 376 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 QTRT1Q9BXR0 403 aaKnown RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 KCNK15Q9H427 330 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF430Q9H8G1 570 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 RCL1Q9Y2P8 373 aaKnown RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 CHST2Q9Y4C5 530 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 OR2W5A6NFC9 320 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 TCF21O43680 179 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 LEPP41159 167 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 CDC34P49427 236 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 BTN1A1Q13410 526 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 SMUG1Q53HV7 270 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 C16orf47Q6ZP98 133 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 NCCRP1Q6ZVX7 275 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 OVCH2Q7RTZ1 564 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 COMMD7Q86VX2 200 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 MSRB3Q8IXL7 192 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 LRRC75A-AS1Q8N1F1 130 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 KIR3DL3Q8N743 410 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 USMG5Q96IX5 58 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 PPIL3Q9H2H8 161 aaKnown RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 ANK1P16157 1881 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 A0A0A6YYJ9 748 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TEX48A0A1B0GUV7 120 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TCRBV4S1A1TA0A5B7 111 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SLC25A17O43808 307 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ZIC3O60481 467 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 NEURL1O76050 574 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 OR2H2O95918 312 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 HBZP02008 142 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 INHBBP09529 407 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SSTP61278 116 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 HSPE1P61604 102 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 FAM3AP98173 230 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 OPCMLQ14982 345 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PSMG4Q5JS54 123 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF660Q6AZW8 331 aaPredicted RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 OLIG3Q7RTU3 272 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TEX45Q8NA69 505 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SLC24A4Q8NFF2 622 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PGLYRP3Q96LB9 341 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SMIM3Q9BZL3 60 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 MRPS16Q9Y3D3 137 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 A0A087WV48 116 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ZC3H12DA2A288 527 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 FFAR1O14842 300 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PDE6DO43924 150 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 GABRB1P18505 474 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SPINK2P20155 84 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 IGHV1-2P23083 117 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 DLX6P56179 175 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 FABP5Q01469 135 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PNRC1Q12796 327 aaPredicted RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 EFNB3Q15768 340 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 HLA-DRB5Q30154 266 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 FAM122CQ6P4D5 195 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 Q6ZN92 141 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ACP7Q6ZNF0 438 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 BCDIN3DQ7Z5W3 292 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 RNASEH2CQ8TDP1 164 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 C16orf92Q96LL3 132 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 FAAP24Q9BTP7 215 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SRXN1Q9BYN0 137 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 MMP28Q9H239 520 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 CLEC2DQ9UHP7 191 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PXMP4Q9Y6I8 212 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 MIA3Q5JRA6 1907 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 EREGO14944 169 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 RBFOX2O43251 390 aaKnown RBP eCLIP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 CXorf1O96002 111 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 IGKV1D-16P01601 117 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF735P0CB33 412 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 MVDP53602 400 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 B2MP61769 119 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SERF2P84101 59 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TIAL1Q01085 375 aaKnown RBP eCLIP3.95□□□□□ -1.781e-7■■■■■ 27.5
CCNL1-215ENST00000474539 FAM27E3Q08E93 113 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms