RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 FOXI3A8MTJ6 420 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-209ENST00000474432 RPLP1P05386 114 aaKnown RBP14.56□□□□□ -0.08
COL7A1-209ENST00000474432 OR3A3P47888 321 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 RPS25P62851 125 aaKnown RBP14.56□□□□□ -0.08
COL7A1-209ENST00000474432 SLC35B1P78383 322 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 PNLIPRP3Q17RR3 467 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 SVOPQ8N4V2 548 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 KCNG3Q8TAE7 436 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 NEDD4LQ96PU5 975 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 NABP2Q9BQ15 211 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 MRPL20Q9BYC9 149 aaKnown RBP14.56□□□□□ -0.08
COL7A1-209ENST00000474432 ANKRD60Q9BZ19 345 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 ISYNA1Q9NPH2 558 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 TPRKBQ9Y3C4 175 aa14.56□□□□□ -0.08
COL7A1-209ENST00000474432 WI2-2373I1.2A0A1W2PRP0 233 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 SOCS1O15524 211 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 DUS4LO95620 317 aaKnown RBP14.55□□□□□ -0.08
COL7A1-209ENST00000474432 BPNT1O95861 308 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 CRHBPP24387 322 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 CNTFRP26992 372 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 SLC6A1P30531 599 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 HOXD3P31249 432 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-209ENST00000474432 MYCNOSP40205 109 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 TEX38Q6PEX7 206 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 ZNF833PQ6ZTB9 187 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 ZNF695Q8IW36 515 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 FAM89BQ8N5H3 189 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 KLHL30-AS1Q8NEE0 82 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 OR6M1Q8NGM8 313 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 UFD1Q92890 307 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 GALMQ96C23 342 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 DUX3Q96PT4 197 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 RASL11BQ9BPW5 248 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 ZNF251Q9BRH9 671 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 PARP12Q9H0J9 701 aaKnown RBP14.55□□□□□ -0.08
COL7A1-209ENST00000474432 IFI27L2Q9H2X8 130 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 ZNF580Q9UK33 172 aa14.55□□□□□ -0.08
COL7A1-209ENST00000474432 IGF1P05019 195 aa14.54□□□□□ -0.08
COL7A1-209ENST00000474432 CPEP16870 476 aa14.54□□□□□ -0.08
COL7A1-209ENST00000474432 BLVRBP30043 206 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-209ENST00000474432 TMEM50BP56557 158 aa14.54□□□□□ -0.08
COL7A1-209ENST00000474432 OR51D1Q8NGF3 324 aa14.54□□□□□ -0.08
COL7A1-209ENST00000474432 HDHD3Q9BSH5 251 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-209ENST00000474432 AK6Q9Y3D8 172 aaKnown RBP14.54□□□□□ -0.08
COL7A1-209ENST00000474432 SAA2-SAA4A0A096LPE2 208 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 TRBV6-6A0A0A6YYG2 114 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 SLC17A2O00624 439 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 RGS10O43665 173 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 IGHG4P01861 327 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 SAA2P0DJI9 122 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-209ENST00000474432 SOX6P35712 828 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 MAP2K4P45985 399 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 FABP5Q01469 135 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 MLLT11Q13015 90 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-209ENST00000474432 FOXE3Q13461 319 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 P2RY14Q15391 338 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 ZNF107Q9UII5 783 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-209ENST00000474432 LRRC42Q9Y546 428 aa14.53□□□□□ -0.08
COL7A1-209ENST00000474432 COL7A1Q02388 2944 aa14.52□□□□□ -0.08
COL7A1-209ENST00000474432 DNAH9Q9NYC9 4486 aa14.52□□□□□ -0.08
COL7A1-209ENST00000474432 NUDT19A8MXV4 375 aa14.52□□□□□ -0.09
COL7A1-209ENST00000474432 HSMCR30P0CW71 290 aa14.52□□□□□ -0.09
COL7A1-209ENST00000474432 SLC2A2P11168 524 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-209ENST00000474432 PPIFP30405 207 aaKnown RBP14.52□□□□□ -0.09
COL7A1-209ENST00000474432 ACTBP60709 375 aa14.52□□□□□ -0.09
COL7A1-209ENST00000474432 PRSS48Q7RTY5 328 aa14.52□□□□□ -0.09
COL7A1-209ENST00000474432 MYOZ3Q8TDC0 251 aa14.52□□□□□ -0.09
COL7A1-209ENST00000474432 AK3Q9UIJ7 227 aa14.52□□□□□ -0.09
COL7A1-209ENST00000474432 LDLRAD4O15165 306 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 ST8SIA5O15466 376 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 PROP1O75360 226 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 RGS11O94810 467 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 ELANEP08246 267 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 PSMB8P28062 276 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 CDX1P47902 265 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-209ENST00000474432 PLA2G7Q13093 441 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 KIAA0141Q14154 515 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-209ENST00000474432 MMDQ15546 238 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 DEFB136Q30KP8 78 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 IL1F10Q8WWZ1 152 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 KCTD7Q96MP8 289 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 MGLLQ99685 303 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 AGMATQ9BSE5 352 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 GON7Q9BXV9 100 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 PLEKHJ1Q9NW61 149 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 HSF4Q9ULV5 492 aa14.51□□□□□ -0.09
COL7A1-209ENST00000474432 IGHV7-81A0A0B4J1V7 117 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 CCL24O00175 119 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 CT45A6P0DMU7 189 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 CT45A5P0DMU8 189 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 CT45A7P0DMV0 189 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 ARSBP15848 533 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 CLDN12P56749 244 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 KIR2DS1Q14954 304 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 TRAM1Q15629 374 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 SSX1Q16384 188 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 RPL39P5Q59GN2 51 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 CXorf66Q5JRM2 361 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-209ENST00000474432 NPBQ8NG41 125 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms