RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR11L1Q8NGX0 322 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 OR51H1Q8NH63 302 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 CYTH2Q99418 400 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ACBD6Q9BR61 282 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 CDCA4Q9BXL8 241 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 OR51E2Q9H255 320 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 DOK5Q9P104 306 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 SNX24Q9Y343 169 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 MINOS1-NBL1R4GNA1 71 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ZNF638Q14966 1978 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 RTEL1-TNFRSF6BF6WH68 1400 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 TRGV2A0A075B6R0 118 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 IGHV3-15A0A0B4J1V0 119 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 IGKV1-12A0A0C4DH73 117 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 GPR171O14626 319 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 UBE2L6O14933 153 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 ZNF189O75820 626 aaPredicted RBP1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 LY6HO94772 140 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 SOD1P00441 154 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 IGKV1D-12P01611 117 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 UCHL1P09936 223 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 CFL1P23528 166 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 F8A1P23610 371 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 ALDH3A1P30838 453 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 RAP1GDS1P52306 607 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 TRMT12Q53H54 448 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 PABPC1L2AQ5JQF8 200 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 N4BP2L1Q5TBK1 243 aaPredicted RBP1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 AGTRAPQ6RW13 159 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 Q6ZRU5 148 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 SLC35F6Q8N357 371 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 RNF133Q8WVZ7 376 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 TAMM41Q96BW9 452 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 ABHD14BQ96IU4 210 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 NAA38Q9BRA0 125 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 Q9BRP9 147 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 CHST5Q9GZS9 411 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 BABAM2Q9NXR7 383 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 LINC00527Q9UJ94 153 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 LCTP09848 1927 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 SHANK3Q9BYB0 1731 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 OTOFQ9HC10 1997 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 COL18A1P39060 1754 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 KIAA0232Q92628 1395 aa1.08□□□□□ -2.24
ECHDC1-213ENST00000474240 DNMT1P26358 1616 aaKnown RBP1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 CRB1P82279 1406 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ZNF879B4DU55 563 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 COPEO14579 308 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 EPPINO95925 133 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ANGP03950 147 aaKnown RBP1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 CD7P09564 240 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ESDP10768 282 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 CCL2P13500 99 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 CRHBPP24387 322 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 MAGEA12P43365 314 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 PSMB3P49720 205 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ACTBP60709 375 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 RAB8AP61006 207 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ACTG1P63261 375 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 XIAPP98170 497 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 GNA12Q03113 381 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ZNF90Q03938 601 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 C1DQ13901 141 aaKnown RBP1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ANGPT1Q15389 498 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 SS18Q15532 418 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 CLEC12BQ2HXU8 276 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 OR10J3Q5JRS4 329 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 TIMM23BQ5SRD1 257 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 ZNF563Q8TA94 476 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 FNDC9Q8TBE3 224 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 OR5P2Q8WZ92 322 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 SERPINB11Q96P15 392 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 HBEGFQ99075 208 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 PECRQ9BY49 303 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 MED28Q9H204 178 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 UBQLN4Q9NRR5 601 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 MAT2BQ9NZL9 334 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 HHLA2Q9UM44 414 aa1.07□□□□□ -2.24
ECHDC1-213ENST00000474240 COL4A2P08572 1712 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 PXDNLA1KZ92 1463 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 DENND4BO75064 1496 aaPredicted RBP1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 CACNA1SQ13698 1873 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 MEIKINA0A087WXM9 373 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 C9J4A7 227 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 C8orf87E5RJ46 101 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 F5H5K5 113 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 POLR3GO15318 223 aaPredicted RBP1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 ZW10O43264 779 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 NEMFO60524 1076 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 HBZP02008 142 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 IL9P15248 144 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 AGTR1P30556 359 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 CRATP43155 626 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 OR1E2P47887 323 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 KCNJ3P48549 501 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 TMEM258P61165 79 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 Q6ZSA8 131 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 SLC35E3Q7Z769 313 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 LHFPL1Q86WI0 220 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 DOLPP1Q86YN1 238 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms