RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TRBV6-6A0A0A6YYG2 114 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 FOXI3A8MTJ6 420 aaPredicted RBP11.36□□□□□ -0.59
VAMP4-203ENST00000474047 TALDO1P37837 337 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 PLAC9Q5JTB6 97 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF880Q6PDB4 577 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 NR2C2APQ86WQ0 139 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 C11orf44Q8N8P7 122 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 CFHR4Q92496 578 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 PTX4Q96A99 478 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 Q9N2K0 584 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 SLC23A1Q9UHI7 598 aa11.36□□□□□ -0.59
VAMP4-203ENST00000474047 NCBP2LA6PVI3 153 aaKnown RBP11.35□□□□□ -0.59
VAMP4-203ENST00000474047 GNB3P16520 340 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 ZBTB25P24278 435 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 HLA-DRB3P79483 266 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 ARL6IP1Q15041 203 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 MOGAT2Q3SYC2 334 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 IDNKQ5T6J7 187 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 SFXN4Q6P4A7 337 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 OR2T10Q8NGZ9 312 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 PHF21AQ96BD5 680 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 CENPOQ9BU64 300 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 RNF167Q9H6Y7 350 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 SERTAD4Q9NUC0 356 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 TRDCB7Z8K6 153 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 AIREO43918 545 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 CEACAM6P40199 344 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 LY6G6FQ5SQ64 297 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 Q6ZS46 218 aa11.35□□□□□ -0.59
VAMP4-203ENST00000474047 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
VAMP4-203ENST00000474047 ANK2Q01484 3957 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
VAMP4-203ENST00000474047 SERPINE3A8MV23 424 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 LANCL1O43813 399 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 FBXO24O75426 580 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 MOSP00540 346 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 SCTP09683 121 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 CLEC2LP0C7M8 214 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
VAMP4-203ENST00000474047 HIST1H1DP16402 221 aaKnown RBP11.34□□□□□ -0.59
VAMP4-203ENST00000474047 CD1BP29016 333 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF137PP52743 207 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 TMEM95Q3KNT9 176 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 FBLN7Q53RD9 439 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 TREML4Q6UXN2 200 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 EDARADDQ8WWZ3 215 aa11.34□□□□□ -0.59
VAMP4-203ENST00000474047 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
VAMP4-203ENST00000474047 RAB27BO00194 218 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 ST8SIA5O15466 376 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 SCGNO76038 276 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 KIR2DS1Q14954 304 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 CDNFQ49AH0 187 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 IZUMO1Q8IYV9 350 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 LGALS14Q8TCE9 139 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 S1PR3Q99500 378 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 KCNK7Q9Y2U2 307 aa11.33□□□□□ -0.6
VAMP4-203ENST00000474047 RAB29O14966 203 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 CSF1P09603 554 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 LSM3P62310 102 aaKnown RBP11.32□□□□□ -0.6
VAMP4-203ENST00000474047 Q6ZPA2 131 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 OR1A1Q9P1Q5 309 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 TET2Q6N021 2002 aaPredicted RBP11.32□□□□□ -0.6
VAMP4-203ENST00000474047 ZNF736B4DX44 427 aaPredicted RBP11.32□□□□□ -0.6
VAMP4-203ENST00000474047 MFNGO00587 321 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 FABP7O15540 132 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 FGF16O43320 207 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 AMY1AP04745 511 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 AMY2AP04746 511 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 FCGR3AP08637 254 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 OR3A3P47888 321 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 EBI3Q14213 229 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 CROCCP3Q8IVE0 287 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 OR4A4PQ8NGN8 299 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 YIPF6Q96EC8 236 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 RASL11BQ9BPW5 248 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 GHITMQ9H3K2 345 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 ZNF221Q9UK13 617 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 ETV7Q9Y603 341 aa11.32□□□□□ -0.6
VAMP4-203ENST00000474047 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 BET1O15155 118 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-203ENST00000474047 CD28P10747 220 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 SERPINB10P48595 397 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 NSUN5P1Q3KNT7 163 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 OR10J5Q8NHC4 309 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
VAMP4-203ENST00000474047 WNT10AQ9GZT5 417 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 C11orf54Q9H0W9 315 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-203ENST00000474047 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
VAMP4-203ENST00000474047 ZNF230Q9UIE0 474 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-203ENST00000474047 SCAND1P57086 179 aa11.3□□□□□ -0.6
VAMP4-203ENST00000474047 GNG2P59768 71 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms