RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CD1BP29016 333 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 MTNR1BP49286 362 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 SRSF7Q16629 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
MCF2L-223ENST00000473345 CT45A1Q5HYN5 189 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 TMEM244Q5VVB8 128 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF529Q6P280 563 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 RPL22L1Q6P5R6 122 aaKnown RBP7.4□□□□□ -1.22
MCF2L-223ENST00000473345 FAM220AQ7Z4H9 259 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 ODF3L1Q8IXM7 274 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF565Q8N9K5 539 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 SUMF2Q8NBJ7 301 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 OR13C3Q8NGS6 347 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 OR2T10Q8NGZ9 312 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 CT45A3Q8NHU0 189 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 RAB2BQ8WUD1 216 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 CCDC107Q8WV48 283 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 ORAI1Q96D31 301 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 CPNE2Q96FN4 548 aaPredicted RBP7.4□□□□□ -1.22
MCF2L-223ENST00000473345 PGLYRP3Q96LB9 341 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 UBE2E2Q96LR5 201 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 RETNQ9HD89 108 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 PALMDQ9NP74 551 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 H3BMQ9 156 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 SAP30O75446 220 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 OR8U8P0C7N1 319 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 HSMCR30P0CW71 290 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 EGR2P11161 476 aaPredicted RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 CELP19835 753 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 VDAC1P21796 283 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 GADD45AP24522 165 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 FGF9P31371 208 aaPredicted RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 SOX6P35712 828 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 CCR9P51686 369 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 GTF2A1P52655 376 aaPredicted RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 ZNF137PP52743 207 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 GBX2P52951 348 aaPredicted RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 ALKBH1Q13686 389 aaKnown RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 GNMTQ14749 295 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 LIPKQ5VXJ0 399 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 ACSM6Q6P461 480 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 ASCL4Q6XD76 172 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 SLC25A48Q6ZT89 311 aaKnown RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 UFD1Q92890 307 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 ARL11Q969Q4 196 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 RASL11BQ9BPW5 248 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 PDCD1LG2Q9BQ51 273 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 DPCDQ9BVM2 203 aaPredicted RBP7.39□□□□□ -1.23
MCF2L-223ENST00000473345 OR51E2Q9H255 320 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 ZNF580Q9UK33 172 aa7.39□□□□□ -1.23
MCF2L-223ENST00000473345 TRDV1A0A1B0GX56 115 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 C12orf77C9JDV5 145 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 SDCBPO00560 298 aaPredicted RBP7.38□□□□□ -1.23
MCF2L-223ENST00000473345 GEMIN2O14893 280 aaKnown RBP7.38□□□□□ -1.23
MCF2L-223ENST00000473345 SLC22A1O15245 554 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 SULT1B1O43704 296 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 GPX5O75715 221 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 MT-ND4P03905 459 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 PSMA1P25786 263 aaKnown RBP7.38□□□□□ -1.23
MCF2L-223ENST00000473345 BLVRBP30043 206 aaPredicted RBP7.38□□□□□ -1.23
MCF2L-223ENST00000473345 RAB9AP51151 201 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 INSL3P51460 131 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 RPS11P62280 158 aaKnown RBP eCLIP7.38□□□□□ -1.23
MCF2L-223ENST00000473345 LSAMPQ13449 338 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 IL13RA2Q14627 380 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 TRAM1Q15629 374 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 CNPY1Q3B7I2 92 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 TIMM50Q3ZCQ8 353 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 ZNF429Q86V71 674 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 MS4A15Q8N5U1 240 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 PARP16Q8N5Y8 322 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 MINDY2Q8NBR6 621 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 PXT1Q8NFP0 134 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 OR10A7Q8NGE5 316 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 OR10V1Q8NGI7 309 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 OR1L1Q8NH94 360 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 TNFAIP8L1Q8WVP5 186 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 SMIM19Q96E16 107 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 BARHL1Q9BZE3 327 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 TOLLIPQ9H0E2 274 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 TAS2R4Q9NYW5 299 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 STUB1Q9UNE7 303 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 GAB2Q9UQC2 676 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 VSIG4Q9Y279 399 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
MCF2L-223ENST00000473345 FCN1O00602 326 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 AIREO43918 545 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 HTR3BO95264 441 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 KCNJ3P48549 501 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 VEGFCP49767 419 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 RBM11P57052 281 aaKnown RBP7.37□□□□□ -1.23
MCF2L-223ENST00000473345 RPS25P62851 125 aaKnown RBP7.37□□□□□ -1.23
MCF2L-223ENST00000473345 FABP5Q01469 135 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 FAM27D1Q5T7N8 215 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 TMEM91Q6ZNR0 172 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 ZFP41Q8N8Y5 198 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 C8orf31Q8N9H6 132 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 OR52M1Q8NGK5 317 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 GHSRQ92847 366 aa7.37□□□□□ -1.23
MCF2L-223ENST00000473345 THAP7Q9BT49 309 aaPredicted RBP7.37□□□□□ -1.23
MCF2L-223ENST00000473345 CENPOQ9BU64 300 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms