RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 MRPL30Q8TCC3 161 aaKnown RBP15.45■□□□□ 0.06
COL9A3-210ENST00000472880 GHRLQ9UBU3 117 aa15.45■□□□□ 0.06
COL9A3-210ENST00000472880 ERGIC3Q9Y282 383 aa15.45■□□□□ 0.06
COL9A3-210ENST00000472880 RGS11O94810 467 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 ACTBP60709 375 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 RNLSQ5VYX0 342 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 IZUMO2Q6UXV1 221 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 ZNF251Q9BRH9 671 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 CHCHD6Q9BRQ6 235 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 MRPL20Q9BYC9 149 aaKnown RBP15.44■□□□□ 0.06
COL9A3-210ENST00000472880 SCN3BQ9NY72 215 aa15.44■□□□□ 0.06
COL9A3-210ENST00000472880 PTGES3LE9PB15 166 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 ATP6V1G2O95670 118 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 UBBP0CG47 229 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 HSPA13P48723 471 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 HTD2P86397 168 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 FHL3Q13643 280 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 TMEM65Q6PI78 240 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 GALMQ96C23 342 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 CYYR1Q96J86 154 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 NEDD4LQ96PU5 975 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 PRR25Q96S07 402 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 PARP11Q9NR21 331 aa15.43■□□□□ 0.06
COL9A3-210ENST00000472880 NBR2O15453 112 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 YPEL1O60688 119 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 HLA-DRB1P01911 266 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 ECI1P42126 302 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 ODF3L1Q8IXM7 274 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 OR2AK2Q8NG84 335 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 OR11H1Q8NG94 326 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 YPEL2Q96QA6 119 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 NABP2Q9BQ15 211 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 MND1Q9BWT6 205 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 ABRACLQ9P1F3 81 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 WSB1Q9Y6I7 421 aa15.42■□□□□ 0.06
COL9A3-210ENST00000472880 SAA2-SAA4A0A096LPE2 208 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 ATP6V0E1O15342 81 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 SAA2P0DJI9 122 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-210ENST00000472880 CNTFRP26992 372 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 ZNF833PQ6ZTB9 187 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 C5orf24Q7Z6I8 188 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 MYOZ3Q8TDC0 251 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 UBE2E2Q96LR5 201 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 SULT4A1Q9BR01 284 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 OR51J1Q9H342 316 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 KIAA1456Q9P272 454 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 TPRKBQ9Y3C4 175 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 LRRC42Q9Y546 428 aa15.41■□□□□ 0.06
COL9A3-210ENST00000472880 G3V318 75 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 OR8U8P0C7N1 319 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 NHLRC4P0CG21 123 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-210ENST00000472880 CHATP28329 748 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 PPIFP30405 207 aaKnown RBP15.4■□□□□ 0.06
COL9A3-210ENST00000472880 OR3A3P47888 321 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 HMGN3Q15651 99 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 C5orf64Q2M2E5 130 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 ZNF260Q3ZCT1 412 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 RBM48Q5RL73 367 aaKnown RBP15.4■□□□□ 0.06
COL9A3-210ENST00000472880 LY6G6FQ5SQ64 297 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 GLT8D1Q68CQ7 371 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 IL1F10Q8WWZ1 152 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 TMEM59Q9BXS4 323 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 DUSP21Q9H596 190 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 STEAP1Q9UHE8 339 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 VSIG4Q9Y279 399 aa15.4■□□□□ 0.06
COL9A3-210ENST00000472880 LSM2Q9Y333 95 aaKnown RBP15.4■□□□□ 0.06
COL9A3-210ENST00000472880 LSM4Q9Y4Z0 139 aaKnown RBP15.4■□□□□ 0.06
COL9A3-210ENST00000472880 TRAV41A0A0B4J266 112 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 VSIG8P0DPA2 414 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 RPS27AP62979 156 aaKnown RBP15.39■□□□□ 0.05
COL9A3-210ENST00000472880 ZNF616Q08AN1 781 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 INSL4Q14641 139 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 IRF3Q14653 427 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 ACSM3Q53FZ2 586 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 OR10K2Q6IF99 312 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 FAM71F2Q6NXP2 309 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 C6orf201Q7Z4U5 140 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 MS4A15Q8N5U1 240 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 RITA1Q96K30 269 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 KLK15Q9H2R5 256 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 GNB4Q9HAV0 340 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 CHMP1AQ9HD42 196 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-210ENST00000472880 SCOCQ9UIL1 159 aa15.39■□□□□ 0.05
COL9A3-210ENST00000472880 IGHV7-81A0A0B4J1V7 117 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 BLVRBP30043 206 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-210ENST00000472880 SPHARQ15513 63 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 FAM27D1Q5T7N8 215 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 LIN54Q6MZP7 749 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 ZNF491Q8N8L2 437 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 OR1N2Q8NGR9 330 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 PHYHIPQ92561 330 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 CNBD2Q96M20 576 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 OR5B12Q96R08 314 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 FAAP24Q9BTP7 215 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 TMED9Q9BVK6 235 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 IFI27L2Q9H2X8 130 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 PIPOXQ9P0Z9 390 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 ZNF256Q9Y2P7 627 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-210ENST00000472880 U3KQK5 164 aa15.38■□□□□ 0.05
COL9A3-210ENST00000472880 KMT2CQ8NEZ4 4911 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms