RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 Q8NDZ9 215 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 OR51H1Q8NH63 302 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 ABHD14BQ96IU4 210 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 SMDT1Q9H4I9 107 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 SPACA1Q9HBV2 294 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 UBQLN4Q9NRR5 601 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 CCL26Q9Y258 94 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 MRPS16Q9Y3D3 137 aaKnown RBP1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 SHANK3Q9BYB0 1731 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 A0A0J9YX75 114 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 LINC00854A0A1B0GVQ3 168 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 DAPL1A0PJW8 107 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 TMEM213A2RRL7 107 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 VPS37CA5D8V6 355 aaPredicted RBP1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 ODF3BA8MYP8 253 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 TOX3O15405 576 aaPredicted RBP1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 STK16O75716 305 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 ATP6V1G2O95670 118 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 HBZP02008 142 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 P0DMU3 169 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 FAM231AP0DMU4 169 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 FAM231CP0DMU5 169 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 IGHV3-30-3P0DP02 117 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 ZNF7P17097 686 aaPredicted RBP1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 CFL1P23528 166 aaKnown RBP1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 RWDD2BP57060 319 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 BLIDQ8IZY5 108 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 LFNGQ8NES3 379 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 OR11H1Q8NG94 326 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 OR52E4Q8NGH9 312 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 STOML3Q8TAV4 291 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 TRNT1Q96Q11 434 aaKnown RBP1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 MGLLQ99685 303 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 MND1Q9BWT6 205 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 C1QTNF6Q9BXI9 259 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 MED28Q9H204 178 aa1.98□□□□□ -2.09
PRPF40A-208ENST00000472760 LTBP2Q14767 1821 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 MYO5BQ9ULV0 1848 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 SOD1P00441 154 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 OR13C7P0DN81 318 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 SLC25A16P16260 332 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 CDK2P24941 298 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 ATP6V0CP27449 155 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 GRPRP30550 384 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 OR1E2P47887 323 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 DNAL1Q4LDG9 190 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 CCDC112Q8NEF3 446 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 MBOAT7Q96N66 472 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 RBP7Q96R05 134 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 KLF6Q99612 283 aaPredicted RBP1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 GPR22Q99680 433 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 UPK3BQ9BT76 320 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 EIF5A2Q9GZV4 153 aaKnown RBP1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 NRBP2Q9NSY0 501 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 TXNL4BQ9NX01 149 aaKnown RBP1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 GMEB1Q9Y692 573 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 MINOS1-NBL1R4GNA1 71 aa1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 TRPM3Q9HCF6 1732 aaPredicted RBP1.97□□□□□ -2.09
PRPF40A-208ENST00000472760 YLPM1P49750 1951 aaKnown RBP1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 DHRS12A0PJE2 317 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 KNCNA6PVL3 124 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 J3QKU1 62 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 OVOL1O14753 267 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 LY6HO94772 140 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 ORM1P02763 201 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 ESDP10768 282 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 CASQ1P31415 396 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 CD200P41217 278 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 GABRA4P48169 554 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 DAD1P61803 113 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 SPATA31B1PQ5VZV4 182 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 RASL11AQ6T310 242 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 ACY3Q96HD9 319 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 CDCA4Q9BXL8 241 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 PSORS1C2Q9UIG4 136 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 CFAP45Q9UL16 551 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 SNX12Q9UMY4 172 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 MYO16Q9Y6X6 1858 aa1.96□□□□□ -2.1
PRPF40A-208ENST00000472760 IGHV3-73A0A0B4J1V6 119 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 METTL15A6NJ78 407 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 FTCDNL1E5RQL4 147 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 LY6LH3BQJ8 138 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 GOLGA8RI6L899 631 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 COPEO14579 308 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 ZNF189O75820 626 aaPredicted RBP1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 IFI30P13284 250 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 OPRM1P35372 400 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 SMAGPQ0VAQ4 97 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 CLEC6AQ6EIG7 209 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 OR5L1Q8NGL2 311 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 C16orf78Q8WTQ4 265 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 TLCD1Q96CP7 247 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 DNAJC30Q96LL9 226 aa1.95□□□□□ -2.1
PRPF40A-208ENST00000472760 TRIOBPQ9H2D6 2365 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 A0A1W2PQL4 384 aaPredicted RBP1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 FNDC10F2Z333 226 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 CCRL2O00421 344 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 UBFD1O14562 309 aaKnown RBP1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 ADAP1O75689 374 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms