RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 IGHG2P01859 326 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 CD36P16671 472 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 ZNF32P17041 273 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 HSPA9P38646 679 aaKnown RBP3.85□□□□□ -1.79
SMC5-202ENST00000471372 LINC00313P59037 77 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 RSU1Q15404 277 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 UAP1Q16222 522 aaPredicted RBP3.85□□□□□ -1.79
SMC5-202ENST00000471372 LDLRAD2Q5SZI1 272 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 SYPL2Q5VXT5 272 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 CYHR1Q6ZMK1 362 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 GID4Q8IVV7 300 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 ZNF615Q8N8J6 731 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 PYURFQ96I23 114 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 OR51I1Q9H343 314 aa3.85□□□□□ -1.79
SMC5-202ENST00000471372 DHCR7Q9UBM7 475 aaKnown RBP3.85□□□□□ -1.79
SMC5-202ENST00000471372 ARID1AO14497 2285 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 TRIP11Q15643 1979 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 H3BSA7 217 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 DCTN3O75935 186 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 GYPCP04921 128 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 HIST1H1EP10412 219 aaKnown RBP3.84□□□□□ -1.79
SMC5-202ENST00000471372 IHHQ14623 411 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 JOSD1Q15040 202 aaPredicted RBP3.84□□□□□ -1.79
SMC5-202ENST00000471372 MAPK14Q16539 360 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 LRRC75BQ2VPJ9 315 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 TMEM176BQ3YBM2 270 aaPredicted RBP3.84□□□□□ -1.79
SMC5-202ENST00000471372 OR10K2Q6IF99 312 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 ZNF567Q8N184 647 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 OR1M1Q8NGA1 313 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 TRIB3Q96RU7 358 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 MED18Q9BUE0 208 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
SMC5-202ENST00000471372 MED28Q9H204 178 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 PHLDA3Q9Y5J5 127 aa3.84□□□□□ -1.79
SMC5-202ENST00000471372 IGHV3OR15-7A0A075B7D8 119 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 TGIF2-C20orf24A0A0A6YYL0 155 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 A0A0B4J2C4 111 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 A0A1W2PQL4 384 aaPredicted RBP3.83□□□□□ -1.8
SMC5-202ENST00000471372 H3BMM0 161 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 MRASO14807 208 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 RPP14O95059 124 aaKnown RBP3.83□□□□□ -1.8
SMC5-202ENST00000471372 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 CCR7P32248 378 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 LSM6P62312 80 aaKnown RBP3.83□□□□□ -1.8
SMC5-202ENST00000471372 HERVK_113P63121 156 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 BSPH1Q075Z2 132 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 MFSD8Q8NHS3 518 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 UBE2WQ96B02 151 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 OPTNQ96CV9 577 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 SCRT1Q9BWW7 348 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 TRIM45Q9H8W5 580 aaPredicted RBP3.83□□□□□ -1.8
SMC5-202ENST00000471372 DNAJC12Q9UKB3 198 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 TRAPPC1Q9Y5R8 145 aa3.83□□□□□ -1.8
SMC5-202ENST00000471372 YLPM1P49750 1951 aaKnown RBP3.83□□□□□ -1.8
SMC5-202ENST00000471372 SCN4AP35499 1836 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 BRWD3Q6RI45 1802 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 PLCH2O75038 1416 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 TMEM114B3SHH9 223 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 H3BQ85 93 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 IFNA16P05015 189 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 GUSBP08236 651 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 CTXN2P0C2S0 81 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 OR1E2P47887 323 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 AP3S2P59780 193 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 RPS24P62847 133 aaKnown RBP3.82□□□□□ -1.8
SMC5-202ENST00000471372 FABP5Q01469 135 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 PDK2Q15119 407 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 TMEM31Q5JXX7 168 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 HMGN2P46Q86SG4 172 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 SLC51BQ86UW2 128 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 TRAPPC5Q8IUR0 188 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 CDC26Q8NHZ8 85 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 Q8WTZ3 238 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 ASB17Q8WXJ9 295 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 ABHD14BQ96IU4 210 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 CCDC94Q9BW85 323 aaPredicted RBP3.82□□□□□ -1.8
SMC5-202ENST00000471372 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
SMC5-202ENST00000471372 U3KQK5 164 aa3.82□□□□□ -1.8
SMC5-202ENST00000471372 GOLGA6L4A6NEF3 574 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 KCNK1O00180 336 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 TNNC2P02585 160 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 IGKV3-11P04433 115 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 TCRBP04435 133 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 PFN1P07737 140 aaKnown RBP3.81□□□□□ -1.8
SMC5-202ENST00000471372 CTLA4P16410 223 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 CTBP2P56545 445 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 HLA-DRB3P79483 266 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 AESQ08117 197 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 TSPAN31Q12999 210 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 APOFQ13790 326 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 EBPQ15125 230 aaKnown RBP3.81□□□□□ -1.8
SMC5-202ENST00000471372 N4BP2L1Q5TBK1 243 aaPredicted RBP3.81□□□□□ -1.8
SMC5-202ENST00000471372 SFXN4Q6P4A7 337 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 CCDC112Q8NEF3 446 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 C16orf78Q8WTQ4 265 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 MYO5BQ9ULV0 1848 aa3.81□□□□□ -1.8
SMC5-202ENST00000471372 SNAPC4Q5SXM2 1469 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 ZFYVE9O95405 1425 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 TRAV8-1A0A0A6YYK1 113 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 C5orf49A4QMS7 147 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms