RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 GNMTQ14749 295 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 KCTD9Q7L273 389 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 LDLRAD3Q86YD5 345 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 SGPP2Q8IWX5 399 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 CMTM1Q8IZ96 169 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 BVESQ8NE79 360 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 NRGNQ92686 78 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 DACT3Q96B18 629 aaPredicted RBP12.46□□□□□ -0.41
COL4A5-203ENST00000470339 SEC22CQ9BRL7 303 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 BPESC1Q9GZL8 116 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 MED28Q9H204 178 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 SLC2A9Q9NRM0 540 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 FBN2P35556 2912 aa12.46□□□□□ -0.42
COL4A5-203ENST00000470339 PTPN13Q12923 2485 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 MEX3AA1L020 520 aaKnown RBP12.45□□□□□ -0.42
COL4A5-203ENST00000470339 PFDN1O60925 122 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 SFT2D2O95562 160 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 DUS4LO95620 317 aaKnown RBP12.45□□□□□ -0.42
COL4A5-203ENST00000470339 OR8U9P0C7N5 309 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 PI3P19957 117 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 DNASE1P24855 282 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 RAB7AP51149 207 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 LMO4P61968 165 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 C8orf31Q8N9H6 132 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 OR8U1Q8NH10 309 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 MITD1Q8WV92 249 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 RTN4IP1Q8WWV3 396 aaPredicted RBP12.45□□□□□ -0.42
COL4A5-203ENST00000470339 MBD6Q96DN6 1003 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 PERPQ96FX8 193 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
COL4A5-203ENST00000470339 RBM7Q9Y580 266 aaKnown RBP12.45□□□□□ -0.42
COL4A5-203ENST00000470339 APCP25054 2843 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 A0A087X0M5 115 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 PPIAL4CA0A0B4J2A2 164 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 A0A1B0GX30 115 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 hCG_1809904A0A1W2PP81 198 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 A0A1W2PPE2 198 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 A0A1W2PR64 198 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 A0A1W2PRV1 198 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 A8MXK9 166 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 MPPED1O15442 326 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 SSNA1O43805 119 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 B3GALNT1O75752 331 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 HLA-AP01891 365 aaKnown RBP12.44□□□□□ -0.42
COL4A5-203ENST00000470339 LIPFP07098 398 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 PPIAL4GP0DN37 164 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 CCL3L1P16619 93 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 OMGP23515 440 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 KRTAP10-9P60411 292 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF818PQ6ZRF7 136 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 C1orf122Q6ZSJ8 110 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF645Q8N7E2 425 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 OR2AK2Q8NG84 335 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 OR52B4Q8NGK2 314 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 CLDND2Q8NHS1 167 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 GALNT14Q96FL9 552 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 AGMATQ9BSE5 352 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 PARP12Q9H0J9 701 aaKnown RBP12.44□□□□□ -0.42
COL4A5-203ENST00000470339 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
COL4A5-203ENST00000470339 IGHV3-43A0A0B4J1X8 118 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 TEX13DA0A0J9YY54 714 aaPredicted RBP12.43□□□□□ -0.42
COL4A5-203ENST00000470339 IFNA2P01563 188 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 IGHV3-43DP0DP04 118 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 ANXA3P12429 323 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 VAMP1P23763 118 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 LTC4SQ16873 150 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 PHLDA2Q53GA4 152 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 PRAMEF5Q5TYX0 476 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
COL4A5-203ENST00000470339 C11orf42Q8N5U0 333 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 PHB2Q99623 299 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 NEURL2Q9BR09 285 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 SUCNR1Q9BXA5 334 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 NARFLQ9H6Q4 476 aa12.43□□□□□ -0.42
COL4A5-203ENST00000470339 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
COL4A5-203ENST00000470339 KIAA1324LA8MWY0 1029 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-203ENST00000470339 M0R1W7 72 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 HSD17B6O14756 317 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 PHF1O43189 567 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-203ENST00000470339 FOXH1O75593 365 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 PGLYRP1O75594 196 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-203ENST00000470339 MMP23AO75900 390 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 IGLV2-14P01704 120 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 IGHV1-8P0DP01 117 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 SLC25A16P16260 332 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 NFYBP25208 207 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 CD34P28906 385 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 FAM53AQ6NSI3 398 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-203ENST00000470339 DRAM1Q8N682 238 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms