RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 C1orf122Q6ZSJ8 110 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 PDZD9Q8IXQ8 264 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 ABHD12Q8N2K0 398 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 PNKDQ8N490 385 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 ARRDC1Q8N5I2 433 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 OR52L2PQ8NGH6 319 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 OR4C16Q8NGL9 310 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 OR6F1Q8NGZ6 308 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 OR9G1Q8NH87 305 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 LHX4Q969G2 390 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 TOMM40LQ969M1 308 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 PRRT1Q99946 306 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
HDAC6-216ENST00000468949 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 YAE1D1Q9NRH1 226 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 RDH8Q9NYR8 311 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 OR1A1Q9P1Q5 309 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF221Q9UK13 617 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 RBMX2Q9Y388 322 aaKnown RBP6.66□□□□□ -1.34
HDAC6-216ENST00000468949 NF1P21359 2839 aa6.66□□□□□ -1.34
HDAC6-216ENST00000468949 IGKV1D-8A0A087WSZ0 117 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 TRBV6-7A0A0A0MS04 114 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 A8MV72 311 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 LANCL1O43813 399 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 YPEL1O60688 119 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 IGHV3-7P01780 117 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 NFYAP23511 347 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 SRP14P37108 136 aaKnown RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 CEACAM3P40198 252 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 ECI1P42126 302 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 GPR12P47775 334 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 LUMP51884 338 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 DLX6P56179 175 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 PAX2Q02962 417 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 PAX8Q06710 450 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 KLRD1Q13241 179 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 SCGB2A2Q13296 93 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 DCTN2Q13561 401 aaKnown RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 Q3ZCU0 254 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 FAAP20Q6NZ36 180 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 Q6ZPA2 131 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 OR56B4Q8NH76 319 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 FAM216AQ8WUB2 273 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 SECTM1Q8WVN6 248 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 TNFRSF14Q92956 283 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 LEAP2Q969E1 77 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 CREB3L1Q96BA8 519 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 YPEL2Q96QA6 119 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF2Q9BSG1 426 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 TINAGL1Q9GZM7 467 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-216ENST00000468949 SIRPDQ9H106 197 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 OR2D2Q9H210 308 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 LINC00574Q9H8X3 128 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 PALMDQ9NP74 551 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 PSG11Q9UQ72 335 aa6.65□□□□□ -1.34
HDAC6-216ENST00000468949 NSD1Q96L73 2696 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 IGKV1-6A0A0C4DH72 117 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 A0A1W2PRD5 423 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 A0A1W2PRF3 423 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 A0A1W2PRM7 423 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 INAFM1C9JVW0 142 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 LYRM1O43325 122 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 MMP23AO75900 390 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 SLC22A5O76082 557 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 PPYP01298 95 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 CD74P04233 296 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 CGB3P0DN86 165 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 CGB7P0DN87 165 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 MMP9P14780 707 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 AADACP22760 399 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 PRB3Q04118 309 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 KLF9Q13886 244 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 HERPUD1Q15011 391 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 ABCA11PQ4W5N1 156 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 MORN2Q502X0 79 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 LPCAT3Q6P1A2 487 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 OVCH2Q7RTZ1 564 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 H1FOOQ8IZA3 346 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 LYG1Q8N1E2 194 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 Q8N7P7 452 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 POC5Q8NA72 575 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 NANPQ8TBE9 248 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 RPEQ96AT9 228 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 DACT3Q96B18 629 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 UPRTQ96BW1 309 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 SCGB3A2Q96PL1 93 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 TBX15Q96SF7 602 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 S1PR3Q99500 378 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 SDHCQ99643 169 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 SLC6A7Q99884 636 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 TMPRSS13Q9BYE2 586 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 SLC5A7Q9GZV3 580 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 MS4A7Q9GZW8 240 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 MMP28Q9H239 520 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 UNKLQ9H9P5 680 aaKnown RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 HRASLSQ9HDD0 168 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 PIPOXQ9P0Z9 390 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms