RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 GABRG3Q99928 467 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 AGMATQ9BSE5 352 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 ABCG5Q9H222 651 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 ARV1Q9H2C2 271 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 MS4A6AQ9H2W1 248 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 ACOT13Q9NPJ3 140 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 SPANXA1Q9NS26 97 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 TAS2R13Q9NYV9 303 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 MYH9P35579 1960 aaKnown RBP2.35□□□□□ -2.03
XRN1-207ENST00000468894 ZNF638Q14966 1978 aaKnown RBP2.35□□□□□ -2.03
XRN1-207ENST00000468894 CDK5RAP2Q96SN8 1893 aa2.35□□□□□ -2.03
XRN1-207ENST00000468894 NCOA1Q15788 1441 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ITGB4P16144 1822 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ECM29Q5VYK3 1845 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 A0A087WUJ7 227 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 A6NDN8 102 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 PRORSD1PA6NEY8 169 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ANKRD65E5RJM6 399 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ERI3O43414 337 aaKnown RBP2.34□□□□□ -2.03
XRN1-207ENST00000468894 HAND1O96004 215 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 MT-CO2P00403 227 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 CD8AP01732 235 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 COX4I1P13073 169 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 CYBAP13498 195 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 TAC1P20366 129 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 F8A1P23610 371 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ERP29P30040 261 aaKnown RBP2.34□□□□□ -2.03
XRN1-207ENST00000468894 RPA3P35244 121 aaPredicted RBP2.34□□□□□ -2.03
XRN1-207ENST00000468894 TALDO1P37837 337 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 IFNGR2P38484 337 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 UBE2E1P51965 193 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 DLX6P56179 175 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 GNG2P59768 71 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 CDC42P60953 191 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 RPS11P62280 158 aaKnown RBP eCLIP2.34□□□□□ -2.03
XRN1-207ENST00000468894 RELAQ04206 551 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 PPP1R1AQ13522 171 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 TFDP2Q14188 446 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 TRAM1Q15629 374 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 HIST3H3Q16695 136 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 HLA-DRB5Q30154 266 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ARHGAP11BQ3KRB8 267 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 PYCR3Q53H96 274 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 CST9Q5W186 159 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 LPCAT3Q6P1A2 487 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 XKRXQ6PP77 449 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 SMARCD3Q6STE5 483 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 C12orf54Q6X4T0 127 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 TMEM136Q6ZRR5 245 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 GRINAQ7Z429 371 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ANGPTL5Q86XS5 388 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 VKORC1L1Q8N0U8 176 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 CBR4Q8N4T8 237 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 ZNF676Q8N7Q3 588 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 OR4C13Q8NGP0 309 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 GRPEL2Q8TAA5 225 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 SPPL2BQ8TCT7 592 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 Q8WTZ3 238 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 TNFAIP8L1Q8WVP5 186 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 RCN3Q96D15 328 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 UBE2E2Q96LR5 201 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 RBP7Q96R05 134 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 VAT1Q99536 393 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 SIGMAR1Q99720 223 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 KIFC1Q9BW19 673 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 CCDC90BQ9GZT6 254 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 OR51I1Q9H343 314 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 PRORYQ9H606 182 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 TP53TG1Q9Y2A0 90 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 UBIAD1Q9Y5Z9 338 aa2.34□□□□□ -2.03
XRN1-207ENST00000468894 DHX57Q6P158 1386 aaKnown RBP2.34□□□□□ -2.04
XRN1-207ENST00000468894 SOGA1O94964 1423 aa2.34□□□□□ -2.04
XRN1-207ENST00000468894 CD109Q6YHK3 1445 aa2.34□□□□□ -2.04
XRN1-207ENST00000468894 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 IGSF23A1L1A6 192 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 BHLHE40O14503 412 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 FABP7O15540 132 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 PLIN3O60664 434 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 CNMDO75829 334 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 IFNGP01579 166 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 RBP1P09455 135 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 OR10J4P0C629 311 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 IFI30P13284 250 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 MYL12AP19105 171 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 OGNP20774 298 aaKnown RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 S100GP29377 79 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 RPL12P30050 165 aaKnown RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 PYCR1P32322 319 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 GALR1P47211 349 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 REG1BP48304 166 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 SULT1A1P50225 295 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 SULT1A2P50226 295 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 RAB25P57735 213 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 RAB2AP61019 212 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 PSG4Q00888 419 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 RUNX1Q01196 453 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 CLEC12BQ2HXU8 276 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 ACSBG2Q5FVE4 666 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 FAM27D1Q5T7N8 215 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 HIST2H3PS2Q5TEC6 136 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms