RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 MCRIP2Q9BUT9 160 aaKnown RBP17.11■□□□□ 0.33
TTC28-204ENST00000468807 MRPL20Q9BYC9 149 aaKnown RBP17.11■□□□□ 0.33
TTC28-204ENST00000468807 DCLRE1BQ9H816 532 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 ABRACLQ9P1F3 81 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 LSM2Q9Y333 95 aaKnown RBP17.11■□□□□ 0.33
TTC28-204ENST00000468807 HSMCR30P0CW71 290 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 HTR2CP28335 458 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 AQP4P55087 323 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 HTD2P86397 168 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 DEFB136Q30KP8 78 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 C1orf100Q5SVJ3 147 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 OR2AK2Q8NG84 335 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 KCNG3Q8TAE7 436 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 RAX2Q96IS3 184 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 P2RX4Q99571 388 aa17.1■□□□□ 0.33
TTC28-204ENST00000468807 ZNF107Q9UII5 783 aaPredicted RBP17.1■□□□□ 0.33
TTC28-204ENST00000468807 CCL24O00175 119 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 OR3A3P47888 321 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 EGFEM1PQ0D2K5 195 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 UNC119Q13432 240 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 FOXE3Q13461 319 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 ZNF251Q9BRH9 671 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 STEAP1Q9UHE8 339 aa17.09■□□□□ 0.33
TTC28-204ENST00000468807 SAA2-SAA4A0A096LPE2 208 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 YPEL1O60688 119 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 SAA2P0DJI9 122 aaPredicted RBP17.08■□□□□ 0.32
TTC28-204ENST00000468807 BLVRBP30043 206 aaPredicted RBP17.08■□□□□ 0.32
TTC28-204ENST00000468807 ACTBP60709 375 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 P2RY14Q15391 338 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 HMGN3Q15651 99 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 ODF3L1Q8IXM7 274 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 OR6M1Q8NGM8 313 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 OR8U1Q8NH10 309 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 KCTD7Q96MP8 289 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 YPEL2Q96QA6 119 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 CCDC90BQ9GZT6 254 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 PLGRKTQ9HBL7 147 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 PLEKHJ1Q9NW61 149 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 LRRC42Q9Y546 428 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 COL7A1Q02388 2944 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 DNAH9Q9NYC9 4486 aa17.08■□□□□ 0.32
TTC28-204ENST00000468807 SLC22A1O15245 554 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 BPNT1O95861 308 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 ELANEP08246 267 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 UCHL1P09936 223 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 CNTFRP26992 372 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 RITA1Q96K30 269 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 NABP2Q9BQ15 211 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 TM2D1Q9BX74 207 aa17.07■□□□□ 0.32
TTC28-204ENST00000468807 ST8SIA5O15466 376 aa17.06■□□□□ 0.32
TTC28-204ENST00000468807 RPS25P62851 125 aaKnown RBP17.06■□□□□ 0.32
TTC28-204ENST00000468807 ZNF833PQ6ZTB9 187 aa17.06■□□□□ 0.32
TTC28-204ENST00000468807 SVOPQ8N4V2 548 aa17.06■□□□□ 0.32
TTC28-204ENST00000468807 NRG4Q8WWG1 115 aa17.06■□□□□ 0.32
TTC28-204ENST00000468807 PARP11Q9NR21 331 aa17.06■□□□□ 0.32
TTC28-204ENST00000468807 WSB1Q9Y6I7 421 aa17.06■□□□□ 0.32
TTC28-204ENST00000468807 TMEM14DPA8MWL7 114 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 NBR2O15453 112 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 RGS10O43665 173 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 IGHG4P01861 327 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 IGF1P05019 195 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 OR5H8P0DN80 308 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 ARSBP15848 533 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 CDX1P47902 265 aaPredicted RBP17.05■□□□□ 0.32
TTC28-204ENST00000468807 QRFPP83859 136 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 CFHR3Q02985 330 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 IRF3Q14653 427 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 URM1Q9BTM9 101 aaKnown RBP17.05■□□□□ 0.32
TTC28-204ENST00000468807 IFI27L2Q9H2X8 130 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 KIAA1456Q9P272 454 aa17.05■□□□□ 0.32
TTC28-204ENST00000468807 AK6Q9Y3D8 172 aaKnown RBP17.05■□□□□ 0.32
TTC28-204ENST00000468807 A0A0A6YYD4 124 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 SOCS1O15524 211 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 NAPSAO96009 420 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 KIR2DS1Q14954 304 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 TMEM65Q6PI78 240 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 OR5M8Q8NGP6 311 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 HDHD3Q9BSH5 251 aaPredicted RBP17.04■□□□□ 0.32
TTC28-204ENST00000468807 ANKRD60Q9BZ19 345 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 LPAR5Q9H1C0 372 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 AK3Q9UIJ7 227 aa17.04■□□□□ 0.32
TTC28-204ENST00000468807 G3V318 75 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 ATP6V0E1O15342 81 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 RAB11BQ15907 218 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 RPL39P5Q59GN2 51 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 LY6G6FQ5SQ64 297 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 FAM131AQ6UXB0 335 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 TMEM91Q6ZNR0 172 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 MOB1BQ7L9L4 216 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 RNF152Q8N8N0 203 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 PIPOXQ9P0Z9 390 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 SLC23A1Q9UHI7 598 aa17.03■□□□□ 0.32
TTC28-204ENST00000468807 SLC17A2O00624 439 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 RAB29O14966 203 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 ARL6IP5O75915 188 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 CALRP27797 417 aaKnown RBP17.02■□□□□ 0.32
TTC28-204ENST00000468807 PSMB8P28062 276 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 LUMP51884 338 aaPredicted RBP17.02■□□□□ 0.32
TTC28-204ENST00000468807 CLDN12P56749 244 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms