RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TMEM106BQ9NUM4 274 aa8.5□□□□□ -1.05
MSH5-213ENST00000468136 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
MSH5-213ENST00000468136 OR1A1Q9P1Q5 309 aa8.5□□□□□ -1.05
MSH5-213ENST00000468136 POMT1Q9Y6A1 747 aa8.5□□□□□ -1.05
MSH5-213ENST00000468136 LOC400499M0QZD8 3231 aa8.5□□□□□ -1.05
MSH5-213ENST00000468136 IGF2RP11717 2491 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 PLCE1Q9P212 2302 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 KBTBD11-OT1A0A1B0GTJ5 212 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 LINC00862A6NCI5 91 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 FAM90A26D6RGX4 464 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 K7EPK0 472 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 SCAF4O95104 1147 aaKnown RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 GAPDHP04406 335 aaKnown RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 OR8U9P0C7N5 309 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 CGB3P0DN86 165 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 CGB7P0DN87 165 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 TPT1P13693 172 aaKnown RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 CD80P33681 288 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 NKX2-1P43699 371 aaPredicted RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 S100A10P60903 97 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 EXOSC2Q13868 293 aaKnown RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 LY6DQ14210 128 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 EDDM3AQ14507 147 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 LRRC10Q5BKY1 277 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 NMSQ5H8A3 153 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 MEX3BQ6ZN04 569 aaKnown RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 LYZL2Q7Z4W2 148 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 PRR18Q8N4B5 295 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 DRAM1Q8N682 238 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 OR4D5Q8NGN0 318 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 OR13A1Q8NGR1 328 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 OR8U1Q8NH10 309 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 NEU4Q8WWR8 484 aaPredicted RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 RRNAD1Q96FB5 475 aaKnown RBP8.49□□□□□ -1.05
MSH5-213ENST00000468136 ADTRPQ96IZ2 230 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 GAFA1Q96PS6 74 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 SLC25A31Q9H0C2 315 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 RAB1BQ9H0U4 201 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 GAL3ST2Q9H3Q3 398 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 CALYQ9NYX4 217 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 GNG12Q9UBI6 72 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 CLN8Q9UBY8 286 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 KCNS2Q9ULS6 477 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 LINC00312Q9Y6C7 94 aa8.49□□□□□ -1.05
MSH5-213ENST00000468136 CELSR3Q9NYQ7 3312 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 ZFHX4Q86UP3 3567 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 IGHV1-69-2A0A0G2JMI3 117 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 NKX2-6A6NCS4 301 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 F5H0A9 414 aaPredicted RBP8.48□□□□□ -1.05
MSH5-213ENST00000468136 C3orf80F5H4A9 247 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 RBFOX2O43251 390 aaKnown RBP eCLIP8.48□□□□□ -1.05
MSH5-213ENST00000468136 GPR137BO60478 399 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 JTBO76095 146 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 ZNF205O95201 554 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 CYB5R3P00387 301 aaPredicted RBP8.48□□□□□ -1.05
MSH5-213ENST00000468136 EDDM3BP56851 147 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 CCL8P80075 99 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 TFF3Q07654 80 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 MST1LQ2TV78 715 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 HFEQ30201 348 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 MORN2Q502X0 79 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 OR1S1Q8NH92 325 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 LINC01560Q8TB33 94 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 ST8SIA2Q92186 375 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 GFOD1Q9NXC2 390 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 SPTBN4Q9H254 2564 aa8.48□□□□□ -1.05
MSH5-213ENST00000468136 CHD3Q12873 2000 aaKnown RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 CACNA1AO00555 2505 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 PCNX1Q96RV3 2341 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 IGHV3OR15-7A0A075B7D8 119 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 TRBV23-1A0A0A0MS06 115 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 A0A1W2PPH5 198 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 MED19A0JLT2 244 aaPredicted RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 MPTX1A8MV57 137 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 DEFB108AA8MXU0 73 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 H0YIZ8 118 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 WRBO00258 174 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 NDUFB3O43676 98 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 MED6O75586 246 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 IGLV2-14P01704 120 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 MBPP02686 304 aaPredicted RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 RPL12P30050 165 aaKnown RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 GPR12P47775 334 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 TAS2R30P59541 319 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 TAGLNQ01995 201 aaKnown RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 ID3Q02535 119 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 BAXQ07812 192 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 EIF4EBP1Q13541 118 aaPredicted RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 C8orf31Q8N9H6 132 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 ZNRF1Q8ND25 227 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 OR52L2PQ8NGH6 319 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 OR51H1Q8NH63 302 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 RNASE11Q8TAA1 199 aaKnown RBP8.47□□□□□ -1.05
MSH5-213ENST00000468136 LHFPL5Q8TAF8 219 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 RAB40CQ96S21 281 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 AIFM2Q9BRQ8 373 aa8.47□□□□□ -1.05
MSH5-213ENST00000468136 ZNF471Q9BX82 626 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms