RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 Q9N2K0 584 aa12.04□□□□□ -0.48
ATG4B-215ENST00000468018 SH2D7A6NKC9 451 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-215ENST00000468018 ITGB1BP1O14713 200 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 FBXO24O75426 580 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 LPLP06858 475 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 CD28P10747 220 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 HLA-DRB3P79483 266 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 TPRA1Q86W33 373 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 C11orf44Q8N8P7 122 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 OR51E2Q9H255 320 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 C12orf4Q9NQ89 552 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 PLSCR3Q9NRY6 295 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 MGAT4AQ9UM21 535 aa12.03□□□□□ -0.48
ATG4B-215ENST00000468018 IGHV3-72A0A0B4J1Y9 119 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 A0A0B4J203 849 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 NOTOA8MTQ0 251 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 ZNF736B4DX44 427 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-215ENST00000468018 MFNGO00587 321 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 RGS11O94810 467 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 CSF1P09603 554 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 CD83Q01151 205 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 LSAMPQ13449 338 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 FAM71F2Q6NXP2 309 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 MOB3BQ86TA1 216 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 LYG1Q8N1E2 194 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 OR2T10Q8NGZ9 312 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 TOLLIPQ9H0E2 274 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 ABRACLQ9P1F3 81 aa12.02□□□□□ -0.49
ATG4B-215ENST00000468018 IGHG2P01859 326 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 HES1Q14469 280 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 HNF4GQ14541 408 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 NDUFA11Q86Y39 141 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 Q8N9W7 124 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 OR10R2Q8NGX6 335 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 RAB3CQ96E17 227 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 CITED2Q99967 270 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-215ENST00000468018 NABP2Q9BQ15 211 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 CMSS1Q9BQ75 279 aaKnown RBP12.01□□□□□ -0.49
ATG4B-215ENST00000468018 PARP12Q9H0J9 701 aaKnown RBP12.01□□□□□ -0.49
ATG4B-215ENST00000468018 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.01□□□□□ -0.49
ATG4B-215ENST00000468018 SSR3Q9UNL2 185 aa12.01□□□□□ -0.49
ATG4B-215ENST00000468018 SAA2-SAA4A0A096LPE2 208 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 MOSP00540 346 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 SCTP09683 121 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 SAA2P0DJI9 122 aaPredicted RBP12□□□□□ -0.49
ATG4B-215ENST00000468018 SLC2A2P11168 524 aaPredicted RBP12□□□□□ -0.49
ATG4B-215ENST00000468018 NEDD8Q15843 81 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 SFXN4Q6P4A7 337 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 FAM71E2Q8N5Q1 922 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 OR2AK2Q8NG84 335 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 IL1F10Q8WWZ1 152 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 KCTD7Q96MP8 289 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 RNF167Q9H6Y7 350 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
ATG4B-215ENST00000468018 LIN7CQ9NUP9 197 aaKnown RBP12□□□□□ -0.49
ATG4B-215ENST00000468018 SLC23A1Q9UHI7 598 aa12□□□□□ -0.49
ATG4B-215ENST00000468018 SMIM30A4D0T7 59 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 TRIM64CA6NLI5 447 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 SERPINE3A8MV23 424 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 PEX14O75381 377 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 DIRAS3O95661 229 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 FCGR3AP08637 254 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 HIST1H1DP16402 221 aaKnown RBP11.99□□□□□ -0.49
ATG4B-215ENST00000468018 CD36P16671 472 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 GADD45AP24522 165 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 SDC2P34741 201 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-215ENST00000468018 C10orf99Q6UWK7 81 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 SETD6Q8TBK2 473 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 RBMXL1Q96E39 390 aaKnown RBP11.99□□□□□ -0.49
ATG4B-215ENST00000468018 S1PR3Q99500 378 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 ABCG5Q9H222 651 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 PIPOXQ9P0Z9 390 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 OR1A1Q9P1Q5 309 aa11.99□□□□□ -0.49
ATG4B-215ENST00000468018 NOTCH3Q9UM47 2321 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 METTL21EPA6NDL7 271 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 ST8SIA5O15466 376 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 PROP1O75360 226 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 TNFAIP8O95379 198 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 OPN1MWP04001 364 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 OPN1MW2P0DN77 364 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 OPN1MW3P0DN78 364 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 GNB3P16520 340 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 ZBTB25P24278 435 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 OR3A3P47888 321 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 F2RL1P55085 397 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 SCAND1P57086 179 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 SRSF7Q16629 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATG4B-215ENST00000468018 Q6ZS49 121 aa11.98□□□□□ -0.49
ATG4B-215ENST00000468018 CHCHD6Q9BRQ6 235 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms