RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 NPPAP01160 153 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 IGKV1D-12P01611 117 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 HCCSP53701 268 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 TMEM187Q14656 261 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 BTNL8Q6UX41 500 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 C5orf24Q7Z6I8 188 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 GHSRQ92847 366 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 Q96M66 194 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 CMC2Q9NRP2 79 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 COA4Q9NYJ1 87 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 OR52A1Q9UKL2 312 aa8.42□□□□□ -1.06
VPS26A-204ENST00000467852 TRAV24A0A0B4J272 114 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 B2RBV5 119 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 FXYD1O00168 92 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 SYT7O43581 403 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 ORC5O43913 435 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 TUSC2O75896 110 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 T-ENOLP0DO92 83 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 PRKACBP22694 351 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 ADARB1P78563 741 aaKnown RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 EXOSC2Q13868 293 aaKnown RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 MICAQ29983 383 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 ASCL4Q6XD76 172 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 Q8NAQ8 132 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 ADAD2Q8NCV1 583 aaKnown RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 OR10V1Q8NGI7 309 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 TMEM163Q8TC26 289 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 CD300LFQ8TDQ1 290 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 RFT1Q96AA3 541 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 NR1H4Q96RI1 486 aaPredicted RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 SPAG8Q99932 426 aaPredicted RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 CHRDL1Q9BU40 450 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 NEK6Q9HC98 313 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 METTL1Q9UBP6 276 aaKnown RBP8.41□□□□□ -1.06
VPS26A-204ENST00000467852 IKZF2Q9UKS7 526 aa8.41□□□□□ -1.06
VPS26A-204ENST00000467852 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.4□□□□□ -1.06
VPS26A-204ENST00000467852 ZNF320A2RRD8 509 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 GGCTO75223 188 aaKnown RBP8.4□□□□□ -1.06
VPS26A-204ENST00000467852 OCM2P0CE71 109 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 OCMP0CE72 109 aaPredicted RBP8.4□□□□□ -1.06
VPS26A-204ENST00000467852 CCL1P22362 96 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 ROM1Q03395 351 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 ATP5G2Q06055 141 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 FAM209BQ5JX69 171 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 RASSF6Q6ZTQ3 369 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 KCNG3Q8TAE7 436 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 ASB17Q8WXJ9 295 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 FAM162AQ96A26 154 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 C7orf34Q96L11 122 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 ADI1Q9BV57 179 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 YIPF3Q9GZM5 350 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 RAB9BQ9NP90 201 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 IL1RAPQ9NPH3 570 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 SNX5Q9Y5X3 404 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 R4GMQ9 66 aa8.4□□□□□ -1.06
VPS26A-204ENST00000467852 SRSF10O75494 262 aaKnown RBP8.39□□□□□ -1.07
VPS26A-204ENST00000467852 OR2C1O95371 312 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 ACTR3P61158 418 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 ODF4Q2M2E3 257 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 ODF3L2Q3SX64 289 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 FAM106AQ4KMX7 169 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 OR4A47Q6IF82 309 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 FAM131AQ6UXB0 335 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 GPHB5Q86YW7 130 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 SAXO1Q8IYX7 474 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 CCDC54Q8NEL0 328 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 CCDC107Q8WV48 283 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 PP6455Q8WZ26 134 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 C10orf35Q96D05 121 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 NICN1Q9BSH3 213 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 TMEM109Q9BVC6 243 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 ING4Q9UNL4 249 aa8.39□□□□□ -1.07
VPS26A-204ENST00000467852 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 TMEM30CPA0ZSE6 113 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 TMEM213A2RRL7 107 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 FAM223BA6NKX1 122 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 PPP5D1E7EU14 171 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 SPINT2O43291 252 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 RBBP9O75884 186 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 CA1P00915 261 aaPredicted RBP8.38□□□□□ -1.07
VPS26A-204ENST00000467852 HLA-AP01891 365 aaKnown RBP8.38□□□□□ -1.07
VPS26A-204ENST00000467852 NPY1RP25929 384 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 EPHA2P29317 976 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 FAM3BP58499 235 aaPredicted RBP8.38□□□□□ -1.07
VPS26A-204ENST00000467852 RPS7P62081 194 aaKnown RBP8.38□□□□□ -1.07
VPS26A-204ENST00000467852 C6orf141Q5SZD1 244 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 FAM223AQ8IWN6 122 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
VPS26A-204ENST00000467852 MFSD4AQ8N468 514 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 SETD9Q8NE22 299 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 OR5D18Q8NGL1 313 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 MRPS24Q96EL2 167 aaKnown RBP8.38□□□□□ -1.07
VPS26A-204ENST00000467852 OPALINQ96PE5 141 aa8.38□□□□□ -1.07
VPS26A-204ENST00000467852 RNF5Q99942 180 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms