RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 RPS11P62280 158 aaKnown RBP eCLIP5.54□□□□□ -1.52
SND1-205ENST00000467238 Q3ZCU0 254 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 SLC22A6Q4U2R8 563 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 DMKNQ6E0U4 476 aaPredicted RBP5.54□□□□□ -1.52
SND1-205ENST00000467238 FAM53AQ6NSI3 398 aaPredicted RBP5.54□□□□□ -1.52
SND1-205ENST00000467238 ZNF497Q6ZNH5 498 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 GPR141Q7Z602 305 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 SLC35E3Q7Z769 313 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 TGIF2LXQ8IUE1 241 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 FOXRED2Q8IWF2 684 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 STPG2Q8N412 459 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 Q8N6K4 173 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 C8orf31Q8N9H6 132 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 ZNF485Q8NCK3 441 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 TMEM104Q8NE00 496 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 TSPAN14Q8NG11 270 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 UBALD1Q8TB05 177 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 ARL11Q969Q4 196 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 ST6GALNAC6Q969X2 333 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 PGLYRP3Q96LB9 341 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 P2RX4Q99571 388 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 S100A13Q99584 98 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 BCL7BQ9BQE9 202 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 SPATA25Q9BR10 227 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 GPR61Q9BZJ8 451 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 ZFP57Q9NU63 452 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 BABAM2Q9NXR7 383 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 SMPD3Q9NY59 655 aaPredicted RBP5.54□□□□□ -1.52
SND1-205ENST00000467238 RCC2Q9P258 522 aaKnown RBP5.54□□□□□ -1.52
SND1-205ENST00000467238 CLEC2DQ9UHP7 191 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 LINC00527Q9UJ94 153 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 ING4Q9UNL4 249 aa5.54□□□□□ -1.52
SND1-205ENST00000467238 DIMT1Q9UNQ2 313 aaKnown RBP5.54□□□□□ -1.52
SND1-205ENST00000467238 EXOSC1Q9Y3B2 195 aaKnown RBP5.54□□□□□ -1.52
SND1-205ENST00000467238 TRAV8-7A0A075B6U6 113 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 IGHV3-43A0A0B4J1X8 118 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 TRIM64CA6NLI5 447 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 LINC01548A6NM66 108 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 C12orf77C9JDV5 145 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 AIPO00170 330 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 AP4M1O00189 453 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 SDCBPO00560 298 aaPredicted RBP5.53□□□□□ -1.52
SND1-205ENST00000467238 SLC31A2O15432 143 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 MT-ND4P03905 459 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 GAPDHP04406 335 aaKnown RBP5.53□□□□□ -1.52
SND1-205ENST00000467238 IGHV3-43DP0DP04 118 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 GTF2F2P13984 249 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 MYL12AP19105 171 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 IL3RAP26951 378 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 MYCNOSP40205 109 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 GPR12P47775 334 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 BCAP31P51572 246 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 ZNF137PP52743 207 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 SCAND1P57086 179 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 SLC35B1P78383 322 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 Q499Y3 187 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 YIF1BQ5BJH7 314 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 VAX1Q5SQQ9 334 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 ATAD3CQ5T2N8 411 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 THOC7Q6I9Y2 204 aaKnown RBP5.53□□□□□ -1.52
SND1-205ENST00000467238 C11orf87Q6NUJ2 197 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 MOB3BQ86TA1 216 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 GAPTQ8N292 157 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 COMMD1Q8N668 190 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 Q8N9W7 124 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 KLHL30-AS1Q8NEE0 82 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 ZNF555Q8NEP9 628 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 OR5AN1Q8NGI8 311 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 OR2T10Q8NGZ9 312 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 NEK7Q8TDX7 302 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 CCDC107Q8WV48 283 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 RTN4IP1Q8WWV3 396 aaPredicted RBP5.53□□□□□ -1.52
SND1-205ENST00000467238 DPF1Q92782 380 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 GHSRQ92847 366 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 ABCG5Q9H222 651 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 SPACA1Q9HBV2 294 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 PLSCR3Q9NRY6 295 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 LIN7CQ9NUP9 197 aaKnown RBP5.53□□□□□ -1.52
SND1-205ENST00000467238 CEPT1Q9Y6K0 416 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 TENM2Q9NT68 2774 aa5.53□□□□□ -1.52
SND1-205ENST00000467238 TRBV5-7A0A0A0MS05 114 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 A0A1W2PPK0 400 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 NCBP2LA6PVI3 153 aaKnown RBP5.52□□□□□ -1.53
SND1-205ENST00000467238 ZNF736B4DX44 427 aaPredicted RBP5.52□□□□□ -1.53
SND1-205ENST00000467238 MOSP00540 346 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 CD1BP29016 333 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 ZNF134P52741 427 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 CFHR3Q02985 330 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 GPR176Q14439 515 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 RGS21Q2M5E4 152 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 TMEM30BQ3MIR4 351 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 DEFB121Q5J5C9 76 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 SYT6Q5T7P8 510 aaPredicted RBP5.52□□□□□ -1.53
SND1-205ENST00000467238 TEX38Q6PEX7 206 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 GLIPR1L1Q6UWM5 242 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 SLC25A48Q6ZT89 311 aaKnown RBP5.52□□□□□ -1.53
SND1-205ENST00000467238 LYPD6Q86Y78 171 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 ZNF695Q8IW36 515 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 STX19Q8N4C7 294 aa5.52□□□□□ -1.53
SND1-205ENST00000467238 JAGN1Q8N5M9 183 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms