RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 OR13A1Q8NGR1 328 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 OR52J3Q8NH60 311 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 BCAS4Q8TDM0 211 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ARL11Q969Q4 196 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ABHD14AQ9BUJ0 271 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 GABARAPL1Q9H0R8 117 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ARMC1Q9NVT9 282 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 MRPL27Q9P0M9 148 aaKnown RBP4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ZNF257Q9Y2Q1 563 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 UFC1Q9Y3C8 167 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 B2RBV5 119 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 GGCTO75223 188 aaKnown RBP4.31□□□□□ -1.72
CXXC4-202ENST00000466963 MMP23AO75900 390 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 AMBPP02760 352 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 TRGV3P03979 118 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 CD1AP06126 327 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 CRISP1P54107 249 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 RBM11P57052 281 aaKnown RBP4.31□□□□□ -1.72
CXXC4-202ENST00000466963 EFNB1P98172 346 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ALKBH1Q13686 389 aaKnown RBP4.31□□□□□ -1.72
CXXC4-202ENST00000466963 RSU1Q15404 277 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 RNF212Q495C1 297 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 AADACL4Q5VUY2 407 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 LINC00528Q8N1L1 170 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ADAD2Q8NCV1 583 aaKnown RBP4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ZNRF4Q8WWF5 429 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 BTBD10Q9BSF8 475 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 NICN1Q9BSH3 213 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 ADGRL4Q9HBW9 690 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 BRD7Q9NPI1 651 aa4.31□□□□□ -1.72
CXXC4-202ENST00000466963 RPL36Q9Y3U8 105 aaKnown RBP4.31□□□□□ -1.72
CXXC4-202ENST00000466963 A0A1B0GVY2 172 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 H0YJX3 145 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 MT-ND4P03905 459 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 HTR1AP08908 422 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 GTF2F2P13984 249 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 C12orf73Q69YU5 71 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 MORN3Q6PF18 240 aaPredicted RBP4.3□□□□□ -1.72
CXXC4-202ENST00000466963 UNQ5815/PRO19632Q6UWF5 114 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 NECAP1Q8NC96 275 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 BVESQ8NE79 360 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 OR8J1Q8NGP2 316 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 OR1L6Q8NGR2 347 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 RBFOX1Q9NWB1 397 aaKnown RBP4.3□□□□□ -1.72
CXXC4-202ENST00000466963 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.3□□□□□ -1.72
CXXC4-202ENST00000466963 IGKV1-27A0A075B6S5 117 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 TRAV24A0A0B4J272 114 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 A0A1W2PN81 502 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 OR4C46A6NHA9 309 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 AIPO00170 330 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 BPNT1O95861 308 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 FCGR1AP12314 374 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 CHRNA7P36544 502 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 SLURP1P55000 103 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 MED21Q13503 144 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 CDK5R1Q15078 307 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 KISS1Q15726 138 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 DEFB136Q30KP8 78 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
CXXC4-202ENST00000466963 SETD9Q8NE22 299 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 HSPB9Q9BQS6 159 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
CXXC4-202ENST00000466963 CNOT2Q9NZN8 540 aaKnown RBP4.3□□□□□ -1.72
CXXC4-202ENST00000466963 GNG12Q9UBI6 72 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 TRBV7-1A0A0A6YYK4 115 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 OR11H12B2RN74 326 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 K7EMT4 169 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 TMEM225BP0DP42 221 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 ALDH3A2P51648 485 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 MORN2Q502X0 79 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 LYG2Q86SG7 212 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 DHFR2Q86XF0 187 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 NKAIN3Q8N8D7 197 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 OR51L1Q8NGJ5 315 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 OR2G2Q8NGZ5 317 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 GALMQ96C23 342 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 C5orf66Q9H5L9 145 aa4.3□□□□□ -1.72
CXXC4-202ENST00000466963 TRAV10A0A0B4J240 114 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 TMEM189A5PLL7 270 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OR9G9P0C7N8 305 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 FSTP19883 344 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 PPP3R1P63098 170 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 CX3CL1P78423 397 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 ATP5G2Q06055 141 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 HNRNPA0Q13151 305 aaKnown RBP4.29□□□□□ -1.72
CXXC4-202ENST00000466963 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
CXXC4-202ENST00000466963 HMGN3Q15651 99 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 C10orf67Q8IYJ2 551 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 SUMF2Q8NBJ7 301 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OR13C3Q8NGS6 347 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 VSTM2AQ8TAG5 236 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 PHLDA1Q8WV24 401 aaPredicted RBP4.29□□□□□ -1.72
CXXC4-202ENST00000466963 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 Q96MT0 163 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 SPIN2AQ99865 258 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 SPIN2BQ9BPZ2 258 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 CHST6Q9GZX3 395 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 TMEM138Q9NPI0 162 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms