RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 HPRT1P00492 218 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 BTF3P20290 206 aaKnown RBP7.58□□□□□ -1.2
HPS4-209ENST00000466781 CTSSP25774 331 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 LDLRAD3Q86YD5 345 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ZNF519Q8TB69 540 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 IL17BQ9UHF5 180 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 PRSS50Q9UI38 385 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 TMEFF2Q9UIK5 374 aaPredicted RBP7.58□□□□□ -1.2
HPS4-209ENST00000466781 TMEM56-RWDD3S4R434 201 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 IGHV1-45A0A0A0MS14 117 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 MC5RP33032 325 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 FAM74A3Q4VXF1 159 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 CXorf66Q5JRM2 361 aaPredicted RBP7.58□□□□□ -1.2
HPS4-209ENST00000466781 CLEC18BQ6UXF7 455 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 FAM24BQ8N5W8 94 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 COPS9Q8WXC6 57 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ABHD14BQ96IU4 210 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ANKRD12Q6UB98 2062 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 BGLAPP02818 100 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 PGA4P0DJD7 388 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 PGA5P0DJD9 388 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 GZMKP49863 264 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 PHYHIPLQ96FC7 376 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ZNF385DQ9H6B1 395 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 MIOXQ9UGB7 285 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ZFP30Q9Y2G7 519 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 hCG_38984A0A1B0GV85 526 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 AP4M1O00189 453 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 HRKO00198 91 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 UCP2P55851 309 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 CLLU1Q5K131 121 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 LRRC75AQ8NAA5 344 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 GPA33Q99795 319 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 SCNM1Q9BWG6 230 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 NEU3Q9UQ49 428 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 PAGE4O60829 102 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 TMEM50BP56557 158 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 BPIFA4PQ86YQ2 179 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 OR4B1Q8NGF8 309 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 DYRK2Q92630 601 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 TBX15Q96SF7 602 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 FRRS1LQ9P0K9 344 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 CGB1A6NKQ9 187 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 ACAA1P09110 424 aaPredicted RBP7.57□□□□□ -1.2
HPS4-209ENST00000466781 LTBRP36941 435 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 RPL24P83731 157 aaKnown RBP7.57□□□□□ -1.2
HPS4-209ENST00000466781 C17orf47Q8NEP4 570 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 OR1K1Q8NGR3 316 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 WDFY2Q96P53 400 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 CHRNA10Q9GZZ6 450 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 IGHV3-72A0A0B4J1Y9 119 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 TCRBV16S1A1N1A0A5B0 115 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 EWSR1Q01844 656 aaKnown RBP eCLIP7.57□□□□□ -1.2
HPS4-209ENST00000466781 P2RY6Q15077 328 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 FAM214BQ7L5A3 538 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 C9orf40Q8IXQ3 194 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 SLC25A45Q8N413 288 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 MRPL30Q8TCC3 161 aaKnown RBP7.57□□□□□ -1.2
HPS4-209ENST00000466781 ZG16BQ96DA0 208 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 SGK494Q96LW2 274 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 TMEM74BQ9NUR3 256 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
HPS4-209ENST00000466781 RNF115Q9Y4L5 304 aa7.57□□□□□ -1.2
HPS4-209ENST00000466781 CEACAM1P13688 526 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 PEBP1P30086 187 aaKnown RBP7.56□□□□□ -1.2
HPS4-209ENST00000466781 FLRT3Q9NZU0 649 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 ELOA3CA0A087WX78 387 aaPredicted RBP7.56□□□□□ -1.2
HPS4-209ENST00000466781 TRAV39A0A0B4J263 110 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 TMEM262E9PQX1 116 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 MPDU1O75352 247 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 ADAP1O75689 374 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 NTN1O95631 604 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 PSG9Q00887 426 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 KLRB1Q12918 225 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 KLF9Q13886 244 aaPredicted RBP7.56□□□□□ -1.2
HPS4-209ENST00000466781 SMUG1Q53HV7 270 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 MARS2Q96GW9 593 aaKnown RBP7.56□□□□□ -1.2
HPS4-209ENST00000466781 TTC3P53804 2025 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 B4DEV8 164 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 CDC42EP2O14613 210 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 S1PR2O95136 353 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 COX6CP09669 75 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 TSPOP30536 169 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 C1QL3Q5VWW1 255 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 ZNF721Q8TF20 911 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 SNX22Q96L94 193 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 PGLYRP3Q96LB9 341 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 CHST5Q9GZS9 411 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 CCL27Q9Y4X3 112 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 LOC105371242A0A075B767 164 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 NKX2-6A6NCS4 301 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 MGST3O14880 152 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 NKX2-8O15522 239 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 PRO1933Q9H354 126 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 A6NJY4 79 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 IFITM10A6NMD0 228 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 NPFFO15130 113 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms