RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RAB12Q6IQ22 244 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 LINC00596Q86U02 117 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 TMEM219Q86XT9 240 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 PRR18Q8N4B5 295 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 Q8NFD4 153 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 OR11H6Q8NGC7 330 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 OR4F5Q8NH21 305 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 OR5R1Q8NH85 324 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 CORO2AQ92828 525 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 AJUBAQ96IF1 538 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 UQCC2Q9BRT2 126 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 OR51J1Q9H342 316 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 RANGRFQ9HD47 186 aaPredicted RBP7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 IDI2-AS1Q9NZ38 188 aa7.88□□□□□ -1.15
RTFDC1-205ENST00000466260 KBTBD11-OT1A0A1B0GTJ5 212 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 A0A1W2PPE3 182 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 SNRPGP15A8MWD9 76 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 F2RL2O00254 374 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 IL5P05113 134 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 CD24P25063 80 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 HTR1DP28221 377 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 KCNJ3P48549 501 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 CLDN12P56749 244 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 SRSF4Q08170 494 aaKnown RBP7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 NHLRC3Q5JS37 347 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 HES5Q5TA89 166 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 SLC35E4Q6ICL7 350 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 FAM53AQ6NSI3 398 aaPredicted RBP7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 HEPN1Q6WQI6 88 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 Q6ZSV7 163 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 LYPD6Q86Y78 171 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 CDH26Q8IXH8 852 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 ZNF565Q8N9K5 539 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 OR4P4Q8NGL7 312 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 LGALS14Q8TCE9 139 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 ARL11Q969Q4 196 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 PTX4Q96A99 478 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 KIRREL1Q96J84 757 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 Q96M66 194 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 ABHD1Q96SE0 405 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 GFI1Q99684 422 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 NICN1Q9BSH3 213 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 TMEM59Q9BXS4 323 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 CST11Q9H112 138 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 MEGF9Q9H1U4 602 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 SCPEP1Q9HB40 452 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 BEX1Q9HBH7 125 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 NUDT15Q9NV35 164 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 STEAP1Q9UHE8 339 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 SCP2D1Q9UJQ7 156 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 TRAPPC2LQ9UL33 140 aa7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 RBMX2Q9Y388 322 aaKnown RBP7.87□□□□□ -1.15
RTFDC1-205ENST00000466260 FAM90A8PA6NJQ4 464 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 XRCC3O43542 346 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 CHST1O43916 411 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 RBBP9O75884 186 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 OR10A3P58181 314 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 GNG2P59768 71 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 UNC119Q13432 240 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 KLF9Q13886 244 aaPredicted RBP7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 HLA-DRB5Q30154 266 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 C5orf24Q7Z6I8 188 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 RTN4RL2Q86UN3 420 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 NR2C2APQ86WQ0 139 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 OR6M1Q8NGM8 313 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 ZNF596Q8TC21 504 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 MALSU1Q96EH3 234 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 MRPS24Q96EL2 167 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 GHITMQ9H3K2 345 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 LIN7BQ9HAP6 207 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 SPACA1Q9HBV2 294 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 RCC2Q9P258 522 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 MRPS7Q9Y2R9 242 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 SIGLEC9Q9Y336 463 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 RNF114Q9Y508 228 aa7.86□□□□□ -1.15
RTFDC1-205ENST00000466260 ANKRD20A5PA0PJZ0 165 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 SDCBPO00560 298 aaPredicted RBP7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 SLC17A2O00624 439 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 SSNA1O43805 119 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 PDCD6O75340 191 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 NDUFA7O95182 113 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 UBBP0CG47 229 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 RCVRNP35243 200 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 MECP2P51608 486 aaKnown RBP7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 PRRX1P54821 245 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 IFITM2Q01629 132 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 RAB11BQ15907 218 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 C1orf100Q5SVJ3 147 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 MINOS1Q5TGZ0 78 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 HIST2H2BDQ6DRA6 164 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 SIGIRRQ6IA17 410 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 ZNF497Q6ZNH5 498 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 C6orf201Q7Z4U5 140 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 OR51D1Q8NGF3 324 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 OR9G1Q8NH87 305 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
RTFDC1-205ENST00000466260 TOMM40LQ969M1 308 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms