RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 Q3ZCU0 254 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 LDLRAD2Q5SZI1 272 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 HACD4Q5VWC8 232 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 Q6ZPA2 131 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 OR52L2PQ8NGH6 319 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 OR10V1Q8NGI7 309 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 OR10X1Q8NGY0 326 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 ABCB10Q9NRK6 738 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 JPT1Q9UK76 154 aa14.27□□□□□ -0.13
COL7A1-205ENST00000465238 TET2Q6N021 2002 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-205ENST00000465238 TMEM235A6NFC5 223 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 TRDCB7Z8K6 153 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 H3BUX3 64 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 TSPAN15O95858 294 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 FCGR3AP08637 254 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 MNDAP41218 407 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 MORN2Q502X0 79 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 PLA1AQ53H76 456 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 STEAP3Q658P3 488 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 FAM53AQ6NSI3 398 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-205ENST00000465238 IZUMO1Q8IYV9 350 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 DYNAPQ8N1N2 210 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 C8orf31Q8N9H6 132 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 ISOC1Q96CN7 298 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 CMTM3Q96MX0 182 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 ELF5Q9UKW6 265 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-205ENST00000465238 CEPT1Q9Y6K0 416 aa14.26□□□□□ -0.13
COL7A1-205ENST00000465238 H3BMQ9 156 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 XRCC3O43542 346 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 SCTP09683 121 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 IL3RAP26951 378 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 PPP1CCP36873 323 aaKnown RBP14.25□□□□□ -0.13
COL7A1-205ENST00000465238 KIR2DS4P43632 304 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 ARHGDIBP52566 201 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 MADCAM1Q13477 382 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 KIR2DS1Q14954 304 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 TPTE2P1Q5T6R2 138 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 C11orf88Q6PI97 169 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 LINC00311Q8N616 119 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 RPEQ96AT9 228 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 OCSTAMPQ9BR26 566 aa14.25□□□□□ -0.13
COL7A1-205ENST00000465238 ZNF230Q9UIE0 474 aaPredicted RBP14.25□□□□□ -0.13
COL7A1-205ENST00000465238 SMIM31A0A1B0GVY4 71 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 OOSP1A8MZH6 123 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 LY6LH3BQJ8 138 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 HSPA12AO43301 675 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 YPEL1O60688 119 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 APOA1P02647 267 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 DTYMKP23919 212 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 GNMTQ14749 295 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 SRSF7Q16629 238 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL7A1-205ENST00000465238 TMEM69Q5SWH9 247 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 CCDC144NLQ6NUI1 221 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 SLC25A48Q6ZT89 311 aaKnown RBP14.24□□□□□ -0.13
COL7A1-205ENST00000465238 NUDCD2Q8WVJ2 157 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 MAFIPQ8WZ33 124 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 TOMM40LQ969M1 308 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 YPEL2Q96QA6 119 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 ST6GALNAC5Q9BVH7 336 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 AUNIPQ9H7T9 357 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 RAB18Q9NP72 206 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 SLC23A1Q9UHI7 598 aa14.24□□□□□ -0.13
COL7A1-205ENST00000465238 VGLL3A8MV65 326 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 FABP7O15540 132 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 HPGDSO60760 199 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 EIF4EP06730 217 aaKnown RBP14.23□□□□□ -0.13
COL7A1-205ENST00000465238 CSF1P09603 554 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 ZBTB25P24278 435 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 BRS3P32247 399 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 RAB13P51153 203 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 LY6EQ16553 131 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 CT45A1Q5HYN5 189 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 LY6G6FQ5SQ64 297 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 DTX3Q8N9I9 347 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 ZNF439Q8NDP4 499 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 OR4A4PQ8NGN8 299 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 OR4C13Q8NGP0 309 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 CT45A3Q8NHU0 189 aa14.23□□□□□ -0.13
COL7A1-205ENST00000465238 FAM110DQ8TAY7 271 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-205ENST00000465238 RANBP3Q9H6Z4 567 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-205ENST00000465238 FAM25AB3EWG3 89 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 FAM25CB3EWG5 89 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 FAM25GB3EWG6 89 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 SLC31A2O15432 143 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 GSTT2P0CG29 244 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 GSTT2BP0CG30 244 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 CEACAM6P40199 344 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 RAB7AP51149 207 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 DYNLT3P51808 116 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 ZNF134P52741 427 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 Q6ZS49 121 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 OR2AK2Q8NG84 335 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 DYNC2LI1Q8TCX1 351 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 ABHD14AQ9BUJ0 271 aa14.22□□□□□ -0.13
COL7A1-205ENST00000465238 CCDC59Q9P031 241 aaKnown RBP14.22□□□□□ -0.13
COL7A1-205ENST00000465238 SSX5O60225 188 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 GAPDHP04406 335 aaKnown RBP14.21□□□□□ -0.13
COL7A1-205ENST00000465238 LPLP06858 475 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 ELK1P19419 428 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms