RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PDLIM3Q53GG5 364 aaPredicted RBP14.19□□□□□ -0.14
CPSF4-209ENST00000465132 ZNF782Q6ZMW2 699 aaPredicted RBP14.19□□□□□ -0.14
CPSF4-209ENST00000465132 C11orf42Q8N5U0 333 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 DTX3Q8N9I9 347 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 GINS4Q9BRT9 223 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 PRDM13Q9H4Q3 707 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 NECAP2Q9NVZ3 263 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 GFOD1Q9NXC2 390 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 TBL2Q9Y4P3 447 aaKnown RBP14.19□□□□□ -0.14
CPSF4-209ENST00000465132 IGHV2-26A0A0B4J1V2 119 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 MEX3AA1L020 520 aaKnown RBP14.18□□□□□ -0.14
CPSF4-209ENST00000465132 GSTZ1O43708 216 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-209ENST00000465132 SSX5O60225 188 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 YPEL1O60688 119 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 CSF1P09603 554 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 GSTT2BP0CG30 244 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 RAB7AP51149 207 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 AP3S2P59780 193 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 PYDC2Q56P42 97 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 BRD3OSQ6XYD6 125 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 PNKDQ8N490 385 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 BEND2Q8NDZ0 799 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 OR2AK2Q8NG84 335 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 OR1L1Q8NH94 360 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 YPEL2Q96QA6 119 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 ABHD1Q96SE0 405 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 ZNF230Q9UIE0 474 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-209ENST00000465132 FAM96BQ9Y3D0 163 aa14.18□□□□□ -0.14
CPSF4-209ENST00000465132 CENPVL3A0A0U1RRI6 287 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 ITGB1BP1O14713 200 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 LTC4SQ16873 150 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 MINOS1Q5TGZ0 78 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 GDPD1Q8N9F7 314 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 OR5AP2Q8NGF4 316 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 DEDD2Q8WXF8 326 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 ZDHHC16Q969W1 377 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 CABLES2Q9BTV7 478 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 MTFP1Q9UDX5 166 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 SLC23A1Q9UHI7 598 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 ELF5Q9UKW6 265 aaPredicted RBP14.17□□□□□ -0.14
CPSF4-209ENST00000465132 MINOS1-NBL1R4GNA1 71 aa14.17□□□□□ -0.14
CPSF4-209ENST00000465132 TRBV6-7A0A0A0MS04 114 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 FAM181BA6NEQ2 426 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 RNASEK-C17orf49H0YIS7 233 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 NPFFO15130 113 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 BET1O15155 118 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 ARG1P05089 322 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 SCTP09683 121 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 GSTT2P0CG29 244 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 NAT1P18440 290 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 COX7A1P24310 79 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 HTR1DP28221 377 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 CEACAM6P40199 344 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 INPP1P49441 399 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 LOXL3P58215 753 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 TAS2R19P59542 299 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 CDK10Q15131 360 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 ZNF626Q68DY1 528 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 TMEM17Q86X19 198 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 Q8N402 240 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 LINC00311Q8N616 119 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 OR5H2Q8NGV7 314 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 OR10X1Q8NGY0 326 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 BORCS5Q969J3 196 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 SOSTQ9BQB4 213 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 ANAPC10Q9UM13 185 aa14.16□□□□□ -0.14
CPSF4-209ENST00000465132 A0A1B0GUS0 222 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 MEIOCA2RUB1 952 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 LEUTXA8MZ59 168 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 OOSP1A8MZH6 123 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 ZNF736B4DX44 427 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-209ENST00000465132 J3QR06 171 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 SLC22A5O76082 557 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 IFNA6P05013 189 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 MORN2Q502X0 79 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 CCDC144NLQ6NUI1 221 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 Q6YL49 198 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 OR52I2Q8NH67 350 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 WFDC12Q8WWY7 111 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 WDR12Q9GZL7 423 aaKnown RBP14.15□□□□□ -0.14
CPSF4-209ENST00000465132 TOLLIPQ9H0E2 274 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 MMP28Q9H239 520 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 BEX1Q9HBH7 125 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 PSG11Q9UQ72 335 aa14.15□□□□□ -0.14
CPSF4-209ENST00000465132 RBM7Q9Y580 266 aaKnown RBP14.15□□□□□ -0.14
CPSF4-209ENST00000465132 TXNL1O43396 289 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 MMP23AO75900 390 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 FBP1P09467 338 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 PTHLHP12272 177 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 FAUP35544 74 aaKnown RBP14.14□□□□□ -0.15
CPSF4-209ENST00000465132 RAG2P55895 527 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 SRSF4Q08170 494 aaKnown RBP14.14□□□□□ -0.15
CPSF4-209ENST00000465132 MADCAM1Q13477 382 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 MEF2DQ14814 521 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 RUSC1-AS1Q66K80 236 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 GVQW1Q8N7I0 195 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 OR52L2PQ8NGH6 319 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 OR4F5Q8NH21 305 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 MAFIPQ8WZ33 124 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms