RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 Q6YL49 198 aa9.6□□□□□ -0.87
APTX-213ENST00000465003 OR10X1Q8NGY0 326 aa9.6□□□□□ -0.87
APTX-213ENST00000465003 OR9G1Q8NH87 305 aa9.6□□□□□ -0.87
APTX-213ENST00000465003 SSX3Q99909 188 aa9.6□□□□□ -0.87
APTX-213ENST00000465003 MMP28Q9H239 520 aa9.6□□□□□ -0.87
APTX-213ENST00000465003 AUNIPQ9H7T9 357 aa9.6□□□□□ -0.87
APTX-213ENST00000465003 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 XRCC3O43542 346 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 TSPAN9O75954 239 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 HTR1DP28221 377 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 RIPPLY3P57055 190 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 MORN2Q502X0 79 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 AP3S1Q92572 193 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 TRBV6-6A0A0A6YYG2 114 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 IGHV3-72A0A0B4J1Y9 119 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 FABP7O15540 132 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 HSPA12AO43301 675 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 GSTP1P09211 210 aaKnown RBP9.59□□□□□ -0.87
APTX-213ENST00000465003 CD34P28906 385 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 MNDAP41218 407 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 IER3P46695 156 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 UBA52P62987 128 aaKnown RBP9.59□□□□□ -0.87
APTX-213ENST00000465003 MOB1BQ7L9L4 216 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 CADM3Q8N126 398 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 ZNF439Q8NDP4 499 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 ZNF596Q8TC21 504 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 ACOT12Q8WYK0 555 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 BCL7BQ9BQE9 202 aa9.59□□□□□ -0.87
APTX-213ENST00000465003 RIMS4Q9H426 269 aaPredicted RBP9.59□□□□□ -0.87
APTX-213ENST00000465003 CCDC59Q9P031 241 aaKnown RBP9.59□□□□□ -0.87
APTX-213ENST00000465003 TRDCB7Z8K6 153 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 HLA-DQB1P01920 261 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 APOA1P02647 267 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 CEACAM6P40199 344 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 OR3A3P47888 321 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 BPIFB3P59826 476 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 MZT2AQ6P582 158 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 TRAT1Q6PIZ9 186 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 LYG1Q8N1E2 194 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.58□□□□□ -0.88
APTX-213ENST00000465003 BEND2Q8NDZ0 799 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 ABHD14BQ96IU4 210 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 ABHD14AQ9BUJ0 271 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.58□□□□□ -0.88
APTX-213ENST00000465003 DPM3Q9P2X0 92 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 JPT1Q9UK76 154 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 RNF150Q9ULK6 438 aa9.58□□□□□ -0.88
APTX-213ENST00000465003 SCGNO76038 276 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 PRRX1P54821 245 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 LINC00205P59089 165 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 OXA1LQ15070 435 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 TPTE2P1Q5T6R2 138 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 CNIH2Q6PI25 160 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 MCFD2Q8NI22 146 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 SNAPC3Q92966 411 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 TOMM40LQ969M1 308 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 RPEQ96AT9 228 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 MDFIQ99750 246 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 TBL2Q9Y4P3 447 aaKnown RBP9.57□□□□□ -0.88
APTX-213ENST00000465003 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 ZNF736B4DX44 427 aaPredicted RBP9.57□□□□□ -0.88
APTX-213ENST00000465003 HSD17B6O14756 317 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 TMEM127O75204 238 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 NFYAP23511 347 aaPredicted RBP9.57□□□□□ -0.88
APTX-213ENST00000465003 HTD2P86397 168 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 RPL39P5Q59GN2 51 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 CCBE1Q6UXH8 406 aaPredicted RBP9.57□□□□□ -0.88
APTX-213ENST00000465003 SLC25A48Q6ZT89 311 aaKnown RBP9.57□□□□□ -0.88
APTX-213ENST00000465003 OR2AK2Q8NG84 335 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 OR10A7Q8NGE5 316 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 OR52M1Q8NGK5 317 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 OR56B4Q8NH76 319 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 SSMEM1Q8WWF3 244 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 MALSU1Q96EH3 234 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 RDH8Q9NYR8 311 aa9.57□□□□□ -0.88
APTX-213ENST00000465003 LINC00854A0A1B0GVQ3 168 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 LEUTXA8MZ59 168 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 LY6LH3BQJ8 138 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 TIMM23O14925 209 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 B3GALNT1O75752 331 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 DTYMKP23919 212 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 ZBTB25P24278 435 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 PNLIPRP3Q17RR3 467 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 LRRC75BQ2VPJ9 315 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 IDO2Q6ZQW0 420 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 LDLRAD3Q86YD5 345 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 ODF3L1Q8IXM7 274 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 BEST4Q8NFU0 473 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 TRIM63Q969Q1 353 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 DIRAS2Q96HU8 199 aa9.56□□□□□ -0.88
APTX-213ENST00000465003 ABHD1Q96SE0 405 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms