RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GOLGA8RI6L899 631 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 CALUO43852 315 aaPredicted RBP1.79□□□□□ -2.12
CLK1-208ENST00000464454 ATP6V1G2O95670 118 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 OCMP0CE72 109 aaPredicted RBP1.79□□□□□ -2.12
CLK1-208ENST00000464454 NQO1P15559 274 aaKnown RBP1.79□□□□□ -2.12
CLK1-208ENST00000464454 PSMB6P28072 239 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 CRATP43155 626 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 SLC35A2P78381 396 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 PDGFRLQ15198 375 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 ACSBG2Q5FVE4 666 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 TMEM75Q8N9X5 138 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 CAPZA3Q96KX2 299 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 RBP7Q96R05 134 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 GPR22Q99680 433 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 DNAJC12Q9UKB3 198 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 MMACHCQ9Y4U1 282 aa1.79□□□□□ -2.12
CLK1-208ENST00000464454 PTPRJQ12913 1337 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 LOC102725191A0A1B0GVB3 256 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 LINC00862A6NCI5 91 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 ARL6IP5O75915 188 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 HBZP02008 142 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 PPP1CCP36873 323 aaKnown RBP1.78□□□□□ -2.12
CLK1-208ENST00000464454 ZNF567Q8N184 647 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 OR5L1Q8NGL2 311 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 DCUN1D5Q9BTE7 237 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 WDR54Q9H977 334 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 MRPS16Q9Y3D3 137 aaKnown RBP1.78□□□□□ -2.12
CLK1-208ENST00000464454 ZNF337Q9Y3M9 751 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 HEY1Q9Y5J3 304 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 ALG5Q9Y673 324 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 CACNA1GO43497 2377 aa1.78□□□□□ -2.12
CLK1-208ENST00000464454 RIMS2Q9UQ26 1411 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 GOLGA6L10A6NI86 522 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 CCRL2O00421 344 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 COPEO14579 308 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 DEDDO75618 318 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 STK16O75716 305 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 YEATS4O95619 227 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 OR13C7P0DN81 318 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 CPMP14384 443 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 GRPRP30550 384 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ANP32AP39687 249 aaKnown RBP1.77□□□□□ -2.13
CLK1-208ENST00000464454 ACTBP60709 375 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 DAD1P61803 113 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ACTG1P63261 375 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 HTR4Q13639 388 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ZNF181Q2M3W8 571 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 DNAL1Q4LDG9 190 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 MRPL51Q4U2R6 128 aaKnown RBP1.77□□□□□ -2.13
CLK1-208ENST00000464454 PDPK2PQ6A1A2 396 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 MNS1Q8NEH6 495 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ERMNQ8TAM6 284 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ABHD14BQ96IU4 210 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ZNF514Q96K75 400 aaPredicted RBP1.77□□□□□ -2.13
CLK1-208ENST00000464454 C7orf50Q9BRJ6 194 aaKnown RBP1.77□□□□□ -2.13
CLK1-208ENST00000464454 UPK3BQ9BT76 320 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 ZNF426Q9BUY5 554 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 EIF5A2Q9GZV4 153 aaKnown RBP1.77□□□□□ -2.13
CLK1-208ENST00000464454 AICDAQ9GZX7 198 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 MED28Q9H204 178 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 SMDT1Q9H4I9 107 aa1.77□□□□□ -2.13
CLK1-208ENST00000464454 PUS1Q9Y606 427 aaKnown RBP eCLIP1.77□□□□□ -2.13
CLK1-208ENST00000464454 TRPM6Q9BX84 2022 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 OTOFQ9HC10 1997 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 KMT2EQ8IZD2 1858 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 RAD50Q92878 1312 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 METTL15A6NJ78 407 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 CRYBA1P05813 215 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 IGHV3-30-3P0DP02 117 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 CD99P14209 185 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 CSRP1P21291 193 aaKnown RBP1.76□□□□□ -2.13
CLK1-208ENST00000464454 CDK2P24941 298 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 ATP6V0CP27449 155 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 OPRM1P35372 400 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 OR1E2P47887 323 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 H2BFSP57053 126 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 SKP1P63208 163 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 ZNF117Q03924 483 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 TBC1D28Q2M2D7 210 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 HLA-DRB5Q30154 266 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 TMEM176BQ3YBM2 270 aaPredicted RBP1.76□□□□□ -2.13
CLK1-208ENST00000464454 SDHAF4Q5VUM1 108 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 SPATA31B1PQ5VZV4 182 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 Q6ZRU5 148 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 FUNDC1Q8IVP5 155 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 CCDC112Q8NEF3 446 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 OR4C16Q8NGL9 310 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 OR10A6Q8NH74 314 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.76□□□□□ -2.13
CLK1-208ENST00000464454 TLCD1Q96CP7 247 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 ACY3Q96HD9 319 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 MND1Q9BWT6 205 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 C1QTNF6Q9BXI9 259 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 DSCAML1Q8TD84 2053 aa1.76□□□□□ -2.13
CLK1-208ENST00000464454 BAHCC1Q9P281 2608 aa1.75□□□□□ -2.13
CLK1-208ENST00000464454 ADAMTSL1Q8N6G6 1762 aa1.75□□□□□ -2.13
CLK1-208ENST00000464454 ZW10O43264 779 aa1.75□□□□□ -2.13
CLK1-208ENST00000464454 STX10O60499 249 aa1.75□□□□□ -2.13
CLK1-208ENST00000464454 E2F6O75461 281 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms