RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 DUXBA0A1W2PPF3 345 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 C17orf100A8MU93 164 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 SH2D1BO14796 132 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 ADAM20O43506 726 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-205ENST00000464187 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-205ENST00000464187 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-205ENST00000464187 NMSQ5H8A3 153 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 GPR157Q5UAW9 335 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 EIF5AL1Q6IS14 154 aaKnown RBP12.15□□□□□ -0.46
COL5A1-205ENST00000464187 ITLN1Q8WWA0 313 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 IL1F10Q8WWZ1 152 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 SAT2Q96F10 170 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-205ENST00000464187 WFDC1Q9HC57 220 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 MMP26Q9NRE1 261 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 IL19Q9UHD0 177 aa12.15□□□□□ -0.46
COL5A1-205ENST00000464187 FBXO24O75426 580 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 HAND1O96004 215 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 APOC3P02656 99 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 TNFSF4P23510 183 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 SULT1A2P50226 295 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 TNFAIP6P98066 277 aaPredicted RBP12.14□□□□□ -0.47
COL5A1-205ENST00000464187 HOXA4Q00056 320 aaPredicted RBP12.14□□□□□ -0.47
COL5A1-205ENST00000464187 ZCCHC24Q8N2G6 241 aaKnown RBP12.14□□□□□ -0.47
COL5A1-205ENST00000464187 UBAC2Q8NBM4 344 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 OR10V1Q8NGI7 309 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 SPIN2AQ99865 258 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 SPIN2BQ9BPZ2 258 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 ARV1Q9H2C2 271 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 NUDT19A8MXV4 375 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 WNT9BO14905 357 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 MED6O75586 246 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 IGFBP2P18065 325 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 LPAR6P43657 344 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 GATA4P43694 442 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 TESK1Q15569 626 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 EFNB3Q15768 340 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 PXDC1Q5TGL8 231 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 UBALD1Q8TB05 177 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 NARS2Q96I59 477 aaKnown RBP12.14□□□□□ -0.47
COL5A1-205ENST00000464187 DIRC2Q96SL1 478 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
COL5A1-205ENST00000464187 OR14J1Q9UGF5 321 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 GLS2Q9UI32 602 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 TRAPPC2LQ9UL33 140 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 WIPI2Q9Y4P8 454 aa12.14□□□□□ -0.47
COL5A1-205ENST00000464187 PKDREJQ9NTG1 2253 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 CLEC18AA5D8T8 446 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 B9A039 149 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.13□□□□□ -0.47
COL5A1-205ENST00000464187 ADH4P08319 380 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 RNF224P0DH78 156 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 F2RP25116 425 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
COL5A1-205ENST00000464187 CCL8P80075 99 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
COL5A1-205ENST00000464187 GNMTQ14749 295 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 HMGN3Q15651 99 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
COL5A1-205ENST00000464187 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 MUC15Q8N387 334 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 PRR18Q8N4B5 295 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 CLEC18CQ8NCF0 446 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 FAM222BQ8WU58 562 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 ABCA4P78363 2273 aa12.13□□□□□ -0.47
COL5A1-205ENST00000464187 PSPNO60542 156 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 IGLV2-14P01704 120 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 WNT2P09544 360 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 VDAC1P21796 283 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 S100GP29377 79 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 CFHR2P36980 270 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 AKR1C2P52895 323 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL5A1-205ENST00000464187 NHLH2Q02577 135 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 AKR1C1Q04828 323 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 LRRC29Q8WV35 223 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 ABHD14BQ96IU4 210 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 HRH4Q9H3N8 390 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 GCM1Q9NP62 436 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 DYNLRB1Q9NP97 96 aa12.12□□□□□ -0.47
COL5A1-205ENST00000464187 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-205ENST00000464187 TMEM218A2RU14 115 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 SSSCA1O60232 199 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 CD55P08174 381 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL5A1-205ENST00000464187 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 SWI5Q1ZZU3 235 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 CXorf66Q5JRM2 361 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-205ENST00000464187 ACP7Q6ZNF0 438 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 OR10Z1Q8NGY1 313 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 OR51H1Q8NH63 302 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms