RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 TRIM63Q969Q1 353 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 MOB3AQ96BX8 217 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 C18orf12Q96KH6 178 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 SDHCQ99643 169 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-210ENST00000463446 RNF5Q99942 180 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 HDHD3Q9BSH5 251 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-210ENST00000463446 SLC5A7Q9GZV3 580 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 TMEM160Q9NX00 188 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 DPM3Q9P2X0 92 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 ITGB1BP2Q9UKP3 347 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 FAM96BQ9Y3D0 163 aa6.09□□□□□ -1.43
EPHA4-210ENST00000463446 SPTAN1Q13813 2472 aaKnown RBP6.09□□□□□ -1.43
EPHA4-210ENST00000463446 USP9XQ93008 2570 aaPredicted RBP6.09□□□□□ -1.44
EPHA4-210ENST00000463446 TEX13DA0A0J9YY54 714 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 KIAA1324LA8MWY0 1029 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 RLN1P04808 185 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 CTSDP07339 412 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 OR8U9P0C7N5 309 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 PTHLHP12272 177 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 RAB13P51153 203 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 IGSF11Q5DX21 431 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 RNASE12Q5GAN4 147 aaKnown RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 SLC25A48Q6ZT89 311 aaKnown RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 CENPSQ8N2Z9 138 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 BVESQ8NE79 360 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 OR8U1Q8NH10 309 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 OR1L1Q8NH94 360 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 SLC6A7Q99884 636 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 PCGF1Q9BSM1 259 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 ABHD14AQ9BUJ0 271 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 SUCNR1Q9BXA5 334 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 C11orf54Q9H0W9 315 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 MMP28Q9H239 520 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 ELF5Q9UKW6 265 aaPredicted RBP6.08□□□□□ -1.44
EPHA4-210ENST00000463446 GPR132Q9UNW8 380 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 PSG11Q9UQ72 335 aa6.08□□□□□ -1.44
EPHA4-210ENST00000463446 SMG1Q96Q15 3661 aaKnown RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 FLNCQ14315 2725 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 CACNA1DQ01668 2161 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 COL12A1Q99715 3063 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 IGHV2-26A0A0B4J1V2 119 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 LINC00854A0A1B0GVQ3 168 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 BUB1B-PAK6H3BSN5 160 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 M0QYG6 137 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 PLA2G10O15496 165 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 LANCL1O43813 399 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 SNAPC5O75971 98 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 ARG1P05089 322 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 SERPINE2P07093 398 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 FAM106CPP0CH98 169 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 SELLP14151 372 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 CD99P14209 185 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 NFYAP23511 347 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 ZFP36P26651 326 aaKnown RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 SSTR5P35346 364 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 THBS3P49746 956 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 DLX6P56179 175 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 RND3P61587 244 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 PAX2Q02962 417 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF273Q14593 569 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 AANATQ16613 207 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 RTL8BQ17RB0 113 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 HIST2H2BCQ6DN03 193 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 DHRS7BQ6IAN0 325 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 LIN54Q6MZP7 749 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 VMO1Q7Z5L0 202 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 LHFPL1Q86WI0 220 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 OR8H3Q8N146 312 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 LYG1Q8N1E2 194 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 OR52L2PQ8NGH6 319 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 COQ8AQ8NI60 647 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 SECTM1Q8WVN6 248 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 RPEQ96AT9 228 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 UPRTQ96BW1 309 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 MSI2Q96DH6 328 aaKnown RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 ABHD14BQ96IU4 210 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 PHB2Q99623 299 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 MARVELD1Q9BSK0 173 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 RSRP1Q9BUV0 290 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 TINAGL1Q9GZM7 467 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 SIRPDQ9H106 197 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 ZFP57Q9NU63 452 aa6.07□□□□□ -1.44
EPHA4-210ENST00000463446 LIN7CQ9NUP9 197 aaKnown RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 USP9YO00507 2555 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-210ENST00000463446 DOPEY2Q9Y3R5 2298 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 DUXBA0A1W2PPF3 345 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 BTBD17A6NE02 478 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 OR5H14A6NHG9 310 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 A8MV72 311 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 SNRPGP15A8MWD9 76 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 C22orf46C9J442 243 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 FAM157AC9JC47 383 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 INMT-MINDY4F8WBC2 141 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 MPPED1O15442 326 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CD5LO43866 347 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CREBL2O60519 120 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 PEX14O75381 377 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 LY86O95711 162 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 HRASP01112 189 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms