RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 STEAP1Q9UHE8 339 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 LINC00527Q9UJ94 153 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 TRBV6-6A0A0A6YYG2 114 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 SLC17A2O00624 439 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ITGB1BP1O14713 200 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 RAB29O14966 203 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 RRP9O43818 475 aaKnown RBP5.73□□□□□ -1.49
PTPRF-210ENST00000463041 NAPSAO96009 420 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 IGF1P05019 195 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ELANEP08246 267 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 HSMCR30P0CW71 290 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 OR5H8P0DN80 308 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ARSBP15848 533 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 CPEP16870 476 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 CRHBPP24387 322 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 PPP1CCP36873 323 aaKnown RBP5.73□□□□□ -1.49
PTPRF-210ENST00000463041 CDX1P47902 265 aaPredicted RBP5.73□□□□□ -1.49
PTPRF-210ENST00000463041 AQP4P55087 323 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 MLLT11Q13015 90 aaPredicted RBP5.73□□□□□ -1.49
PTPRF-210ENST00000463041 LSAMPQ13449 338 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 FOXE3Q13461 319 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 KIR2DS1Q14954 304 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 HMGN3Q15651 99 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 CXorf66Q5JRM2 361 aaPredicted RBP5.73□□□□□ -1.49
PTPRF-210ENST00000463041 NKAPLQ5M9Q1 402 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF880Q6PDB4 577 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 TMEM91Q6ZNR0 172 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 PRSS48Q7RTY5 328 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 C6orf201Q7Z4U5 140 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF695Q8IW36 515 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 MRPL41Q8IXM3 137 aaKnown RBP5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ODF3L1Q8IXM7 274 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 FAM71E2Q8N5Q1 922 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 LINC00482Q8N8I6 264 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 RNF152Q8N8N0 203 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 NRG4Q8WWG1 115 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 TMEM203Q969S6 136 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 NABP2Q9BQ15 211 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ABHD14AQ9BUJ0 271 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ANKRD60Q9BZ19 345 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ACOT13Q9NPJ3 140 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 PIPOXQ9P0Z9 390 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF580Q9UK33 172 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 HSF4Q9ULV5 492 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 MGAT4AQ9UM21 535 aa5.73□□□□□ -1.49
PTPRF-210ENST00000463041 ERICH4A6NGS2 130 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 NUDT19A8MXV4 375 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 CCL24O00175 119 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 SOCS1O15524 211 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 IGHG4P01861 327 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 VDAC1P21796 283 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 MC5RP33032 325 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 HSPA13P48723 471 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 TMEM50BP56557 158 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 ACTBP60709 375 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 EGFEM1PQ0D2K5 195 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 UNC119Q13432 240 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 GNMTQ14749 295 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 C2orf76Q3KRA6 126 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 FAM71F2Q6NXP2 309 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 ETV3LQ6ZN32 361 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF833PQ6ZTB9 187 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 C8orf86Q6ZUL3 223 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 MOB1BQ7L9L4 216 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 C5orf24Q7Z6I8 188 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 KLHL30-AS1Q8NEE0 82 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 NPBQ8NG41 125 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 OR2AK2Q8NG84 335 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 DPF1Q92782 380 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 P2RX4Q99571 388 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 MGLLQ99685 303 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 RNF5Q99942 180 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF251Q9BRH9 671 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 CCDC90BQ9GZT6 254 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 LPAR5Q9H1C0 372 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 PLGRKTQ9HBL7 147 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 CHMP1AQ9HD42 196 aaPredicted RBP5.72□□□□□ -1.49
PTPRF-210ENST00000463041 SLC23A1Q9UHI7 598 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 AK6Q9Y3D8 172 aaKnown RBP5.72□□□□□ -1.49
PTPRF-210ENST00000463041 V9GY05 133 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 COL7A1Q02388 2944 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 DNAH9Q9NYC9 4486 aa5.72□□□□□ -1.49
PTPRF-210ENST00000463041 TNCP24821 2201 aa5.71□□□□□ -1.49
PTPRF-210ENST00000463041 A0A0A6YYD4 124 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 RPLP1P05386 114 aaKnown RBP5.71□□□□□ -1.5
PTPRF-210ENST00000463041 ZBTB25P24278 435 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 CALRP27797 417 aaKnown RBP5.71□□□□□ -1.5
PTPRF-210ENST00000463041 CEACAM6P40199 344 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 OR3A3P47888 321 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 RPS25P62851 125 aaKnown RBP5.71□□□□□ -1.5
PTPRF-210ENST00000463041 FABP5Q01469 135 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 CFHR3Q02985 330 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 P2RY14Q15391 338 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 MMDQ15546 238 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 RAB11BQ15907 218 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 C5orf64Q2M2E5 130 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 LIN54Q6MZP7 749 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 C18orf65Q6ZTR6 163 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 SVOPQ8N4V2 548 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 OR56B1Q8NGI3 324 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms