RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GON7Q9BXV9 100 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 NUDT19A8MXV4 375 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 RGS10O43665 173 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 RGS11O94810 467 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 BPNT1O95861 308 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 HSMCR30P0CW71 290 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 BLVRBP30043 206 aaPredicted RBP14.89□□□□□ -0.03
VARS-220ENST00000461874 MYCNOSP40205 109 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 ZNF695Q8IW36 515 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 KLHL30-AS1Q8NEE0 82 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 HSPB9Q9BQS6 159 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 ANKRD60Q9BZ19 345 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 ISYNA1Q9NPH2 558 aa14.89□□□□□ -0.03
VARS-220ENST00000461874 A0A0A6YYD4 124 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 NAPSAO96009 420 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 SOX6P35712 828 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 RPS25P62851 125 aaKnown RBP14.88□□□□□ -0.03
VARS-220ENST00000461874 TRAM1Q15629 374 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 ZNF880Q6PDB4 577 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 SVOPQ8N4V2 548 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 P2RX4Q99571 388 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 GFI1Q99684 422 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 MRPL20Q9BYC9 149 aaKnown RBP14.88□□□□□ -0.03
VARS-220ENST00000461874 PLEKHJ1Q9NW61 149 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 ABRACLQ9P1F3 81 aa14.88□□□□□ -0.03
VARS-220ENST00000461874 SLC17A2O00624 439 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 RRP9O43818 475 aaKnown RBP14.87□□□□□ -0.03
VARS-220ENST00000461874 RPLP1P05386 114 aaKnown RBP14.87□□□□□ -0.03
VARS-220ENST00000461874 CRHBPP24387 322 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 OR3A3P47888 321 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 KRTAP10-11P60412 298 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 CFHR3Q02985 330 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 MLLT11Q13015 90 aaPredicted RBP14.87□□□□□ -0.03
VARS-220ENST00000461874 FOXE3Q13461 319 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 P2RY14Q15391 338 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 ZNF833PQ6ZTB9 187 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 RNF152Q8N8N0 203 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 OR2AK2Q8NG84 335 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 NABP2Q9BQ15 211 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 GPR61Q9BZJ8 451 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 LPAR5Q9H1C0 372 aa14.87□□□□□ -0.03
VARS-220ENST00000461874 K7EIL1 84 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 SOCS1O15524 211 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 IGF1P05019 195 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 ELANEP08246 267 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 ARSBP15848 533 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 CPEP16870 476 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 PSMA1P25786 263 aaKnown RBP14.86□□□□□ -0.03
VARS-220ENST00000461874 EGFEM1PQ0D2K5 195 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 MMDQ15546 238 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 CXorf66Q5JRM2 361 aaPredicted RBP14.86□□□□□ -0.03
VARS-220ENST00000461874 LCNL1Q6ZST4 164 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 PRSS48Q7RTY5 328 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 FAM89BQ8N5H3 189 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 IL1F10Q8WWZ1 152 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 RITA1Q96K30 269 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 URM1Q9BTM9 101 aaKnown RBP14.86□□□□□ -0.03
VARS-220ENST00000461874 CCDC90BQ9GZT6 254 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 IFI27L2Q9H2X8 130 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 RIMS4Q9H426 269 aaPredicted RBP14.86□□□□□ -0.03
VARS-220ENST00000461874 PLGRKTQ9HBL7 147 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 CHMP1AQ9HD42 196 aaPredicted RBP14.86□□□□□ -0.03
VARS-220ENST00000461874 STEAP1Q9UHE8 339 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 ZNF580Q9UK33 172 aa14.86□□□□□ -0.03
VARS-220ENST00000461874 AK6Q9Y3D8 172 aaKnown RBP14.86□□□□□ -0.03
VARS-220ENST00000461874 SAA2-SAA4A0A096LPE2 208 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 TRBV6-6A0A0A6YYG2 114 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 ARL6IP5O75915 188 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 IGHG4P01861 327 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 SAA2P0DJI9 122 aaPredicted RBP14.85□□□□□ -0.03
VARS-220ENST00000461874 SLC2A2P11168 524 aaPredicted RBP14.85□□□□□ -0.03
VARS-220ENST00000461874 HOXD3P31249 432 aaPredicted RBP14.85□□□□□ -0.03
VARS-220ENST00000461874 ACTBP60709 375 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 MOB1BQ7L9L4 216 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 RAX2Q96IS3 184 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 MGLLQ99685 303 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 MCRIP2Q9BUT9 160 aaKnown RBP14.85□□□□□ -0.03
VARS-220ENST00000461874 ZNF107Q9UII5 783 aaPredicted RBP14.85□□□□□ -0.03
VARS-220ENST00000461874 AK3Q9UIJ7 227 aa14.85□□□□□ -0.03
VARS-220ENST00000461874 FOXI3A8MTJ6 420 aaPredicted RBP14.84□□□□□ -0.03
VARS-220ENST00000461874 CCL24O00175 119 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 ST8SIA5O15466 376 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 VDAC1P21796 283 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 MAP2K4P45985 399 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 CDX1P47902 265 aaPredicted RBP14.84□□□□□ -0.03
VARS-220ENST00000461874 FABP5Q01469 135 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 RAB11BQ15907 218 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 FAM71F2Q6NXP2 309 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 SETD6Q8TBK2 473 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 KCTD7Q96MP8 289 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 DUX3Q96PT4 197 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 ZNF251Q9BRH9 671 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 VCX3BQ9H321 246 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 HSF4Q9ULV5 492 aa14.84□□□□□ -0.03
VARS-220ENST00000461874 WI2-2373I1.2A0A1W2PRP0 233 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 OR5H8P0DN80 308 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 CNTFRP26992 372 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 CALRP27797 417 aaKnown RBP14.83□□□□□ -0.04
VARS-220ENST00000461874 KIR2DS1Q14954 304 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 DPF1Q92782 380 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms