RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KLRC4-KLRK1H3BQV0 150 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 LECT2O14960 151 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 SSNA1O43805 119 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 ATP6V1G2O95670 118 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 OR4A8P0C604 315 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 NQO1P15559 274 aaKnown RBP1.48□□□□□ -2.17
HDAC6-212ENST00000461608 ATP6V0CP27449 155 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 H2BFSP57053 126 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 MEF2BQ02080 365 aaPredicted RBP1.48□□□□□ -2.17
HDAC6-212ENST00000461608 EBPQ15125 230 aaKnown RBP1.48□□□□□ -2.17
HDAC6-212ENST00000461608 HLA-DRB5Q30154 266 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 HES3Q5TGS1 186 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 NOXRED1Q6NXP6 359 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 FAM151BQ6UXP7 276 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 BRD3OSQ6XYD6 125 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 DOLPP1Q86YN1 238 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 TMEM251Q8N6I4 163 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 MFSD8Q8NHS3 518 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 CDC26Q8NHZ8 85 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 CD200R1Q8TD46 325 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 DNAJB3Q8WWF6 145 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 ABHD14BQ96IU4 210 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 NSRP1Q9H0G5 558 aaKnown RBP1.48□□□□□ -2.17
HDAC6-212ENST00000461608 OR51B6Q9H340 312 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 IMP3Q9NV31 184 aaKnown RBP1.48□□□□□ -2.17
HDAC6-212ENST00000461608 PARVAQ9NVD7 372 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 NKIRAS1Q9NYS0 192 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 MTCH2Q9Y6C9 303 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 MYO15BQ96JP2 1530 aa1.48□□□□□ -2.17
HDAC6-212ENST00000461608 SHANK1Q9Y566 2161 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 IGLV10-54A0A075B6I4 117 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 DHRS12A0PJE2 317 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 METTL15A6NJ78 407 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 G3V3Q6 166 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ATP8B1O43520 1251 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ADAP1O75689 374 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ASS1P00966 412 aaKnown RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 APOEP02649 317 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 CRYBA1P05813 215 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 CDK2P24941 298 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 GABRA3P34903 492 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 OPRM1P35372 400 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 PPP1CCP36873 323 aaKnown RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 CDC34P49427 236 aaPredicted RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 SULT1A2P50226 295 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 SLC35A2P78381 396 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 MRPS15P82914 257 aaKnown RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 SLC36A2Q495M3 483 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ACSBG2Q5FVE4 666 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 Q6ZRU5 148 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 C2orf73Q8N5S3 287 aaPredicted RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 YIPF7Q8N8F6 280 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 OR10P1Q8NGE3 313 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ANKRD7Q92527 254 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 TLCD1Q96CP7 247 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 SMIM19Q96E16 107 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ACY3Q96HD9 319 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 MED18Q9BUE0 208 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 MND1Q9BWT6 205 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 CDCA4Q9BXL8 241 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 GNB1LQ9BYB4 327 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 NKX6-2Q9C056 277 aaPredicted RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 DRC3Q9H069 523 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 SMDT1Q9H4I9 107 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 MRPL16Q9NX20 251 aaKnown RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 FAM206AQ9NX38 181 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 USE1Q9NZ43 259 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ZNF230Q9UIE0 474 aaPredicted RBP1.47□□□□□ -2.17
HDAC6-212ENST00000461608 NPATQ14207 1427 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 TRIOBPQ9H2D6 2365 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 SDK2Q58EX2 2172 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 ADCY9O60503 1353 aa1.47□□□□□ -2.17
HDAC6-212ENST00000461608 TRAV8-1A0A0A6YYK1 113 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 LOC102725191A0A1B0GVB3 256 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 A0A1W2PNM2 257 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 GRIFINA4D1Z8 144 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 A8MWP6 167 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 GOLGA8KD6RF30 607 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 GOLGA8MH3BSY2 632 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 COCHO43405 550 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 CRTAPO75718 401 aaPredicted RBP1.46□□□□□ -2.18
HDAC6-212ENST00000461608 ATP5HO75947 161 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 IGLV3-27P01718 113 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 CTSGP08311 255 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 OCM2P0CE71 109 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 DDTP30046 118 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 MIPP30301 263 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 ADORA1P30542 326 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 FUSP35637 526 aaKnown RBP eCLIP1.46□□□□□ -2.18
HDAC6-212ENST00000461608 MAGEA2P43356 314 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 SNAP25P60880 206 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 UBE2IP63279 158 aaKnown RBP1.46□□□□□ -2.18
HDAC6-212ENST00000461608 TNFRSF9Q07011 255 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 TSPAN31Q12999 210 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 APOFQ13790 326 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 GNA13Q14344 377 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 CDKL4Q5MAI5 379 aa1.46□□□□□ -2.18
HDAC6-212ENST00000461608 PTRHD1Q6GMV3 140 aaKnown RBP1.46□□□□□ -2.18
HDAC6-212ENST00000461608 XKRXQ6PP77 449 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms