RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 hCG_38984A0A1B0GV85 526 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 DDTP30046 118 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 OR5D13Q8NGL4 314 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 PCGF1Q9BSM1 259 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 MTCH1Q9NZJ7 389 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 TCFL5Q9UL49 500 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 NCOA6Q14686 2063 aaPredicted RBP12.4□□□□□ -0.42
NCL-207ENST00000461347 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 ZIC3O60481 467 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 FCGR3BO75015 233 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 SPNS3Q6ZMD2 512 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 C18orf12Q96KH6 178 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 OR1A1Q9P1Q5 309 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 AQP7O14520 342 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 LYL1P12980 280 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 TXN2Q99757 166 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 FZR1Q9UM11 496 aa12.4□□□□□ -0.42
NCL-207ENST00000461347 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 J3QT63 122 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 M0R1X1 148 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 NTF3P20783 257 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 MAGEA5P43359 124 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 Q8IYB0 196 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
NCL-207ENST00000461347 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 TAAR9Q96RI9 348 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 ZNF729A6NN14 1252 aaPredicted RBP12.39□□□□□ -0.43
NCL-207ENST00000461347 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 ACTL6BO94805 426 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 RFPL3SP0C7P2 107 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 CTSSP25774 331 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 HIST1H3AP68431 136 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 HEPN1Q6WQI6 88 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 KDF1Q8NAX2 398 aaPredicted RBP12.39□□□□□ -0.43
NCL-207ENST00000461347 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 MSL2Q9HCI7 577 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 IGKV1-27A0A075B6S5 117 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 CTXND1A0A1B0GTU2 59 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 PMS2P1A4D2B8 440 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 OR7C2O60412 319 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 UCP1P25874 307 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 TAF15Q92804 592 aaKnown RBP eCLIP12.39□□□□□ -0.437e-6■□□□□ 8
NCL-207ENST00000461347 RNF122Q9H9V4 155 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 ZDHHC8Q9ULC8 765 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
NCL-207ENST00000461347 IGLV3-12A0A075B6K2 115 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
NCL-207ENST00000461347 DEFB108BQ8NET1 73 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 MUCL1Q96DR8 90 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 TAAR6Q96RI8 345 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 GLRX2Q9NS18 164 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 KLF13Q9Y2Y9 288 aaPredicted RBP12.38□□□□□ -0.43
NCL-207ENST00000461347 POLEQ07864 2286 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 LYZL6O75951 148 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 GYPAP02724 150 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 ZNF25P17030 456 aaPredicted RBP12.38□□□□□ -0.43
NCL-207ENST00000461347 KRTDAPP60985 99 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 ICAM4Q14773 271 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 FADS6Q8N9I5 356 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 ZNF552Q9H707 407 aaPredicted RBP12.38□□□□□ -0.43
NCL-207ENST00000461347 DLL3Q9NYJ7 618 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 TINAGQ9UJW2 476 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BKO60814 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BJP06899 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 COX6A1P12074 109 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BOP23527 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BBP33778 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BDP58876 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BCP62807 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 COTL1Q14019 142 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST2H2BEQ16778 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.38□□□□□ -0.43
NCL-207ENST00000461347 RIPPLY2Q5TAB7 128 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 TPRX1Q8N7U7 411 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BHQ93079 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BNQ99877 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 HIST1H2BMQ99879 126 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
NCL-207ENST00000461347 KIF26AQ9ULI4 1882 aaPredicted RBP12.38□□□□□ -0.43
NCL-207ENST00000461347 CBY3A6NI87 242 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 CXCL1P09341 107 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 CLDND2Q8NHS1 167 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 DOCK10Q96BY6 2186 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 IRF2P14316 349 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 ERVFC1-1P60608 527 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 SPEM2Q0P670 501 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 FGFRL1Q8N441 504 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 PROB1E7EW31 1015 aa12.37□□□□□ -0.43
NCL-207ENST00000461347 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.432e-12■■■■■ 38.4
NCL-207ENST00000461347 ELOBQ15370 118 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms