RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 TVP23CQ96ET8 276 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 TM2D1Q9BX74 207 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 ASCL3Q9NQ33 180 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF391Q9UJN7 358 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF318Q5VUA4 2279 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
LMNB1-203ENST00000460265 LILRA1O75019 489 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 TUSC2O75896 110 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
LMNB1-203ENST00000460265 LFNGQ8NES3 379 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 ERGIC1Q969X5 290 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 CRIM1Q9NZV1 1036 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 RCL1Q9Y2P8 373 aaKnown RBP13.18□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF503-AS2A6NEH8 195 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 AMBPP02760 352 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 CELA3BP08861 270 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF708P17019 499 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 OR3A1P47881 315 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 PAX5Q02548 391 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 HERPUD1Q15011 391 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 GAPTQ8N292 157 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
LMNB1-203ENST00000460265 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 USF3Q68DE3 2245 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 RBFOX3A6NFN3 312 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 RHBDL1O75783 438 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 TUBG1P23258 451 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 ECI1P42126 302 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 NKX2-1P43699 371 aaPredicted RBP13.18□□□□□ -0.3
LMNB1-203ENST00000460265 GNG3P63215 75 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 HIST1H3AP68431 136 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 FBXW9Q5XUX1 488 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 FAM58AQ8N1B3 248 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 LIME1Q9H400 295 aa13.18□□□□□ -0.3
LMNB1-203ENST00000460265 MGAQ8IWI9 3026 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 FAM24AA6NFZ4 105 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 ATXN7O15265 892 aaPredicted RBP13.17□□□□□ -0.3
LMNB1-203ENST00000460265 IZUMO4Q1ZYL8 232 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 FDCSPQ8NFU4 85 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 OR52M1Q8NGK5 317 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 SH3BGRL3Q9H299 93 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 MTCH1Q9NZJ7 389 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 MED12LQ86YW9 2145 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 SEC11BP0C7V7 166 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 LYL1P12980 280 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 PAX1P15863 534 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 HSF4Q9ULV5 492 aa13.17□□□□□ -0.3
LMNB1-203ENST00000460265 C3orf85A0A1B0GTC6 90 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 TIMM8AO60220 97 aaPredicted RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 RNFT1Q5M7Z0 435 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 TBC1D26Q86UD7 250 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 NKX2-6A6NCS4 301 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 LINC00614P0C842 121 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF883P0CG24 379 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 ADAM20O43506 726 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 OR4A8P0C604 315 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 DTYMKP23919 212 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 GLIPR1P48060 266 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 ERVFC1-1P60608 527 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 OR5I1Q13606 314 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 CEACAM21Q3KPI0 293 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 LHFPL1Q86WI0 220 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 RFESDQ8TAC1 157 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 REPIN1Q9BWE0 567 aaKnown RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 ACTR3CQ9C0K3 210 aaPredicted RBP13.16□□□□□ -0.3
LMNB1-203ENST00000460265 EXPH5Q8NEV8 1989 aa13.16□□□□□ -0.3
LMNB1-203ENST00000460265 KIR2DS1A0A191URI9 304 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-203ENST00000460265 MPPED1O15442 326 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 GCGP01275 180 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 IGHV3-13P01766 116 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 IGHV3-7P01780 117 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-203ENST00000460265 KIR2DS4P43632 304 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 KIR2DS1Q14954 304 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 CABLES2Q9BTV7 478 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 PRDM14Q9GZV8 571 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 NBEAQ8NFP9 2946 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 CRYM-AS1A6NIL9 109 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms