RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 OR2AK2Q8NG84 335 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 KCTD7Q96MP8 289 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 VCX3AQ9NNX9 186 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 SLC23A1Q9UHI7 598 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 A0A1W2PRX2 142 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 FOXI3A8MTJ6 420 aaPredicted RBP14.89□□□□□ -0.03
USP39-209ENST00000458268 ZNF736B4DX44 427 aaPredicted RBP14.89□□□□□ -0.03
USP39-209ENST00000458268 TNFAIP8O95379 198 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 SNRPBP14678 240 aaKnown RBP14.89□□□□□ -0.03
USP39-209ENST00000458268 GNB3P16520 340 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 FGF9P31371 208 aaPredicted RBP14.89□□□□□ -0.03
USP39-209ENST00000458268 SDC2P34741 201 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 HTD2P86397 168 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 Q3ZCU0 254 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 CENPVQ7Z7K6 275 aaPredicted RBP14.89□□□□□ -0.03
USP39-209ENST00000458268 ZNF554Q86TJ5 538 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 THNSL2Q86YJ6 484 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 Q8N2B8 174 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 C8orf31Q8N9H6 132 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 TSPAN14Q8NG11 270 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 OR10R2Q8NGX6 335 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 MAFIPQ8WZ33 124 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 RIMS4Q9H426 269 aaPredicted RBP14.89□□□□□ -0.03
USP39-209ENST00000458268 OR1A1Q9P1Q5 309 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 HSF4Q9ULV5 492 aa14.89□□□□□ -0.03
USP39-209ENST00000458268 A0A087WXM4 84 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 METTL21EPA6NDL7 271 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 FAM90A9PA6NNJ1 464 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 NOTOA8MTQ0 251 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 OR3A3P47888 321 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 ARFRP1Q13795 201 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 KHDC1LQ5JSQ8 128 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 OR2T10Q8NGZ9 312 aa14.88□□□□□ -0.03
USP39-209ENST00000458268 EAF1Q96JC9 268 aaPredicted RBP14.88□□□□□ -0.03
USP39-209ENST00000458268 M0QZK8 103 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 TXNL1O43396 289 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 YPEL1O60688 119 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 AMY1AP04745 511 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 AMY2AP04746 511 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 SCTP09683 121 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 LSM3P62310 102 aaKnown RBP14.87□□□□□ -0.03
USP39-209ENST00000458268 SFXN4Q6P4A7 337 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 ZNF880Q6PDB4 577 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 OR5AU1Q8NGC0 362 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 LGALS14Q8TCE9 139 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 ST6GALNAC6Q969X2 333 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 YPEL2Q96QA6 119 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 CENPOQ9BU64 300 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 MRPL20Q9BYC9 149 aaKnown RBP14.87□□□□□ -0.03
USP39-209ENST00000458268 PARP12Q9H0J9 701 aaKnown RBP14.87□□□□□ -0.03
USP39-209ENST00000458268 Q9N2K0 584 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 LINC00527Q9UJ94 153 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 WNK1Q9H4A3 2382 aa14.87□□□□□ -0.03
USP39-209ENST00000458268 SAA2-SAA4A0A096LPE2 208 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 SAA2P0DJI9 122 aaPredicted RBP14.86□□□□□ -0.03
USP39-209ENST00000458268 RAB6AP20340 208 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 TALDO1P37837 337 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 CEACAM6P40199 344 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 IDNKQ5T6J7 187 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 STEAP3Q658P3 488 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 TPRA1Q86W33 373 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 IZUMO1Q8IYV9 350 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 C5orf56Q8N8D9 126 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 ABHD14BQ96IU4 210 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 CITED2Q99967 270 aaPredicted RBP14.86□□□□□ -0.03
USP39-209ENST00000458268 MMP27Q9H306 513 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 ZNF230Q9UIE0 474 aaPredicted RBP14.86□□□□□ -0.03
USP39-209ENST00000458268 RNF150Q9ULK6 438 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 MGAT4AQ9UM21 535 aa14.86□□□□□ -0.03
USP39-209ENST00000458268 BET1O15155 118 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 MOSP00540 346 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 HIST1H1DP16402 221 aaKnown RBP14.85□□□□□ -0.03
USP39-209ENST00000458268 CD1BP29016 333 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 TGFBR1P36897 503 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 LSAMPQ13449 338 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 RPL39P5Q59GN2 51 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 C10orf99Q6UWK7 81 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 MGAM2Q2M2H8 2515 aa14.85□□□□□ -0.03
USP39-209ENST00000458268 TRBV6-6A0A0A6YYG2 114 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 SERPINE3A8MV23 424 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 TRDCB7Z8K6 153 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 RAB27BO00194 218 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 LANCL1O43813 399 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 FCGR3AP08637 254 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 ZBTB25P24278 435 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 SLC35E3Q7Z769 313 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 NOL4LQ96MY1 436 aaPredicted RBP14.84□□□□□ -0.03
USP39-209ENST00000458268 RASL11BQ9BPW5 248 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 WNT10AQ9GZT5 417 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 IFI27L2Q9H2X8 130 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 ELF5Q9UKW6 265 aaPredicted RBP14.84□□□□□ -0.03
USP39-209ENST00000458268 KCNK7Q9Y2U2 307 aa14.84□□□□□ -0.03
USP39-209ENST00000458268 MFNGO00587 321 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 AIREO43918 545 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 ZNF137PP52743 207 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 MMDQ15546 238 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 TIMM50Q3ZCQ8 353 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 CDNFQ49AH0 187 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 GLDNQ6ZMI3 551 aaPredicted RBP14.83□□□□□ -0.04
USP39-209ENST00000458268 ODF3L1Q8IXM7 274 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms