RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 C2orf76Q3KRA6 126 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 FOXRED2Q8IWF2 684 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-203ENST00000456847 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-203ENST00000456847 TRAV1-2A0A0B4J238 106 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 TRDV1A0A1B0GX56 115 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-203ENST00000456847 PLXNB1O43157 2135 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 OR10A3P58181 314 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 HLA-DRB3P79483 266 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 ZNF880Q6PDB4 577 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 SPARTQ8N0X7 666 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 FAM89BQ8N5H3 189 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 CHPT1Q8WUD6 406 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 FCGR1BQ92637 280 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 ARHGAP5-AS1Q96IT6 56 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 HSF4Q9ULV5 492 aa12.86□□□□□ -0.35
CPSF6-203ENST00000456847 RAB3BP20337 219 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 LSAMPQ13449 338 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 CD200R1LQ6Q8B3 271 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 Q8N6K4 173 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 NOL4LQ96MY1 436 aaPredicted RBP12.85□□□□□ -0.35
CPSF6-203ENST00000456847 RASL11BQ9BPW5 248 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 CMSS1Q9BQ75 279 aaKnown RBP12.85□□□□□ -0.35
CPSF6-203ENST00000456847 PECRQ9BY49 303 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 YTHDF1Q9BYJ9 559 aaKnown RBP12.85□□□□□ -0.35
CPSF6-203ENST00000456847 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 LIN7CQ9NUP9 197 aaKnown RBP12.85□□□□□ -0.35
CPSF6-203ENST00000456847 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 RAB22AQ9UL26 194 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 MGAT4AQ9UM21 535 aa12.85□□□□□ -0.35
CPSF6-203ENST00000456847 SLC35B1P78383 322 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
CPSF6-203ENST00000456847 PDLIM3Q53GG5 364 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-203ENST00000456847 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 Q6ZPA2 131 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 ZNF329Q86UD4 541 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 MRPL20Q9BYC9 149 aaKnown RBP12.84□□□□□ -0.35
CPSF6-203ENST00000456847 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 SHISA3A0PJX4 238 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 FOXI3A8MTJ6 420 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-203ENST00000456847 G3V4G9 280 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 ST8SIA5O15466 376 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 HSPA12AO43301 675 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 IGHG2P01859 326 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 PF4P02776 101 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 LY6G6FQ5SQ64 297 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 Q8N9W7 124 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 OR8H1Q8NGG4 311 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 S1PR3Q99500 378 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 SLC23A1Q9UHI7 598 aa12.84□□□□□ -0.35
CPSF6-203ENST00000456847 VWFP04275 2813 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 SAA2-SAA4A0A096LPE2 208 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 IFITM5A6NNB3 132 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 SAA2P0DJI9 122 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-203ENST00000456847 GALP22466 123 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 OR3A3P47888 321 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 TMEM50BP56557 158 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 ODF3L1Q8IXM7 274 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 RBMXL1Q96E39 390 aaKnown RBP12.83□□□□□ -0.36
CPSF6-203ENST00000456847 ABCG5Q9H222 651 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 MEGF8Q7Z7M0 2845 aa12.83□□□□□ -0.36
CPSF6-203ENST00000456847 SMIM30A4D0T7 59 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 LDLRAD4O15165 306 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 CD3GP09693 182 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 CD33P20138 364 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 GADD45AP24522 165 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 GPR12P47775 334 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 MMDQ15546 238 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 ZNF773Q6PK81 442 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 ZNF833PQ6ZTB9 187 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 STPG2Q8N412 459 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 RAB3CQ96E17 227 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 IFI27L2Q9H2X8 130 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 Q9N2K0 584 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 PIPOXQ9P0Z9 390 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 RRP15Q9Y3B9 282 aaKnown RBP12.82□□□□□ -0.36
CPSF6-203ENST00000456847 AP4M1O00189 453 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 PLAC9Q5JTB6 97 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 OR1A1Q9P1Q5 309 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 STUB1Q9UNE7 303 aa12.82□□□□□ -0.36
CPSF6-203ENST00000456847 A0A075B6Q4 140 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 A0A0B4J203 849 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 ZBTB25P24278 435 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 F2RL1P55085 397 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 FAM71F2Q6NXP2 309 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 EDARADDQ8WWZ3 215 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 PLSCR3Q9NRY6 295 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 TXNL4BQ9NX01 149 aaKnown RBP12.81□□□□□ -0.36
CPSF6-203ENST00000456847 SSR3Q9UNL2 185 aa12.81□□□□□ -0.36
CPSF6-203ENST00000456847 NUDT19A8MXV4 375 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 RAB29O14966 203 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms