RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 GABRR1P24046 479 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 ZXDAP98168 799 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 GDF5OSQ5U4N7 250 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 TCEAL6Q6IPX3 200 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 CNKSR3Q6P9H4 555 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 WDR74Q6RFH5 385 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 SULF2Q8IWU5 870 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 LGI3Q8N145 548 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 OR5D13Q8NGL4 314 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 ZCCHC14Q8WYQ9 949 aaKnown RBP3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 GPR146Q96CH1 333 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC35E1Q96K37 410 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 MIEN1Q9BRT3 115 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 IL36GQ9NZH8 169 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 PRSS50Q9UI38 385 aa3.84□□□□□ -1.79
DEPDC1-202ENST00000456315 K7EN84 100 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 PHF1O43189 567 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 KLK10O43240 276 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM127O75204 238 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 MT-CO3P00414 261 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 CA1P00915 261 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 PRB4P10163 310 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 PSG1P11464 419 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM11P17152 192 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 HINT1P49773 126 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 PPOXP50336 477 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 RAC1P63000 192 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 ARG2P78540 354 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 MYBPHQ13203 477 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF266Q14584 549 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 BSXQ3C1V8 233 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 FFAR4Q5NUL3 377 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 MRPL41Q8IXM3 137 aaKnown RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF440Q8IYI8 595 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 CXorf40AQ8TE69 158 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 NAA60Q9H7X0 242 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 DEPPQ9NTK1 212 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 CBY1Q9Y3M2 126 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM14AQ9Y6G1 99 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 PXMP4Q9Y6I8 212 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 ZIC3O60481 467 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 GCGP01275 180 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 FOSL2P15408 326 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 CXCR1P25024 350 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 ARR3P36575 388 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 MNX1P50219 401 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 IDH3GP51553 393 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 GFERP55789 205 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 GNB1P62873 340 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 CFHR1Q03591 330 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM267Q0VDI3 215 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 SGCBQ16585 318 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM108Q6UXF1 575 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 OR14C36Q8NHC7 312 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 SGMS2Q8NHU3 365 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 CIB3Q96Q77 187 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 WWTR1Q9GZV5 400 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 SLC25A22Q9H936 323 aa3.84□□□□□ -1.8
DEPDC1-202ENST00000456315 DOPEY1Q5JWR5 2465 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 UNC79Q9P2D8 2635 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF891A8MT65 544 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ADAM20O43506 726 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 SCGB1D1O95968 90 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 GPX1P07203 203 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 OR5G3P0C626 314 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 NBEAP1P0C6P0 100 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM225BP0DP42 221 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 OTX1P32242 354 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 FOXG1P55316 489 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 PMP22Q01453 160 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 C1orf53Q5VUE5 145 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 FAM220AQ7Z4H9 259 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 SLC22A18ASQ8N1D0 253 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF525Q8N782 197 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 MRPL43Q8N983 215 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 PLPP5Q8NEB5 264 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 CCL28Q9NRJ3 127 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ELOVL5Q9NYP7 299 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 LSM7Q9UK45 103 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 TRAV1-1A0A0B4J248 108 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 UTS2O95399 124 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 C3orf79P0CE67 100 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 EN2P19622 333 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 COL9A1P20849 921 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 IL24Q13007 206 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 UBE2V1Q13404 147 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 MPV17L2Q567V2 206 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 COL13A1Q5TAT6 717 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 NT5CQ8TCD5 201 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 MBD3L1Q8WWY6 194 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 LYRM2Q9NU23 88 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 LAMTOR2Q9Y2Q5 125 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 MEGF11A6BM72 1044 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 PMS2P5A8MQ11 134 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 OVOL3O00110 214 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 HS3ST1O14792 307 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 TAX1BP3O14907 124 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 PPYP01298 95 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms