RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 JAM3Q9BX67 310 aa17.71■□□□□ 0.43
PTPRA-208ENST00000455631 SLA2Q9H6Q3 261 aa17.71■□□□□ 0.43
PTPRA-208ENST00000455631 LY6G6CO95867 125 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 TRGV3P03979 118 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 GTF2F2P13984 249 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 RCC1P18754 421 aaPredicted RBP17.7■□□□□ 0.42
PTPRA-208ENST00000455631 ZNF93P35789 620 aaPredicted RBP17.7■□□□□ 0.42
PTPRA-208ENST00000455631 OR3A3P47888 321 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 SLC22A6Q4U2R8 563 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 LCN12Q6JVE5 192 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 ZNF833PQ6ZTB9 187 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 LHFPL3Q86UP9 236 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 OR52L2PQ8NGH6 319 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 OR9G4Q8NGQ1 327 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 SPACA1Q9HBV2 294 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 RANGRFQ9HD47 186 aaPredicted RBP17.7■□□□□ 0.42
PTPRA-208ENST00000455631 FRAS1Q86XX4 4008 aa17.7■□□□□ 0.42
PTPRA-208ENST00000455631 E9PI62 339 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 RRHO14718 337 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 PPP1CCP36873 323 aaKnown RBP17.69■□□□□ 0.42
PTPRA-208ENST00000455631 RNLSQ5VYX0 342 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 FAM131AQ6UXB0 335 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 SYS1Q8N2H4 156 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 MRPS24Q96EL2 167 aaKnown RBP17.69■□□□□ 0.42
PTPRA-208ENST00000455631 PLEKHA3Q9HB20 300 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 TAF9BQ9HBM6 251 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 GAB2Q9UQC2 676 aa17.69■□□□□ 0.42
PTPRA-208ENST00000455631 SAA2-SAA4A0A096LPE2 208 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 SHISA3A0PJX4 238 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 FCN1O00602 326 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 ZNF780AO75290 641 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-208ENST00000455631 SAA2P0DJI9 122 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-208ENST00000455631 PPP3R1P63098 170 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 AKIRIN2Q53H80 203 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 AMIGO2Q86SJ2 522 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 LFNGQ8NES3 379 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 DDB2Q92466 427 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 RDH12Q96NR8 316 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 MYCBPQ99417 103 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-208ENST00000455631 TMEM138Q9NPI0 162 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 RCC2Q9P258 522 aaKnown RBP17.68■□□□□ 0.42
PTPRA-208ENST00000455631 JPT1Q9UK76 154 aa17.68■□□□□ 0.42
PTPRA-208ENST00000455631 ANKRD34BA5PLL1 514 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 GYG2O15488 501 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 TFAP2AP05549 437 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 CD2P06729 351 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 FASP25445 335 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 SYNJ2BPP57105 145 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 DNAL1Q4LDG9 190 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 RAB12Q6IQ22 244 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 IL34Q6ZMJ4 242 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 Q8N402 240 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 TRUB1Q8WWH5 349 aaKnown RBP17.67■□□□□ 0.42
PTPRA-208ENST00000455631 RGP1Q92546 391 aaPredicted RBP17.67■□□□□ 0.42
PTPRA-208ENST00000455631 LGALS12Q96DT0 336 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 CLCC1Q96S66 551 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 ZNF355PQ9NSJ1 428 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 EXOGQ9Y2C4 368 aaKnown RBP17.67■□□□□ 0.42
PTPRA-208ENST00000455631 HERC2O95714 4834 aa17.67■□□□□ 0.42
PTPRA-208ENST00000455631 C13orf42A0A1B0GVH6 325 aa17.66■□□□□ 0.42
PTPRA-208ENST00000455631 MRPL28Q13084 256 aaKnown RBP17.66■□□□□ 0.42
PTPRA-208ENST00000455631 KLF5Q13887 457 aaPredicted RBP17.66■□□□□ 0.42
PTPRA-208ENST00000455631 TMEM106AQ96A25 262 aa17.66■□□□□ 0.42
PTPRA-208ENST00000455631 KCNIP1Q9NZI2 227 aa17.66■□□□□ 0.42
PTPRA-208ENST00000455631 IZUMO1RA6ND01 250 aa17.65■□□□□ 0.42
PTPRA-208ENST00000455631 BRI3O95415 125 aa17.65■□□□□ 0.42
PTPRA-208ENST00000455631 GBX2P52951 348 aaPredicted RBP17.65■□□□□ 0.42
PTPRA-208ENST00000455631 MEDAGQ5VYS4 303 aa17.65■□□□□ 0.42
PTPRA-208ENST00000455631 LINC00322Q6ZN03 302 aaPredicted RBP17.65■□□□□ 0.42
PTPRA-208ENST00000455631 C5orf24Q7Z6I8 188 aa17.65■□□□□ 0.42
PTPRA-208ENST00000455631 GAPTQ8N292 157 aa17.65■□□□□ 0.42
PTPRA-208ENST00000455631 GPR148Q8TDV2 347 aa17.65■□□□□ 0.42
PTPRA-208ENST00000455631 MAS1P04201 325 aa17.64■□□□□ 0.41
PTPRA-208ENST00000455631 GSTP1P09211 210 aaKnown RBP17.64■□□□□ 0.41
PTPRA-208ENST00000455631 BDKRB2P30411 391 aa17.64■□□□□ 0.41
PTPRA-208ENST00000455631 CD81P60033 236 aa17.64■□□□□ 0.41
PTPRA-208ENST00000455631 CCDC197Q8NCU1 140 aa17.64■□□□□ 0.41
PTPRA-208ENST00000455631 OR2AK2Q8NG84 335 aa17.64■□□□□ 0.41
PTPRA-208ENST00000455631 PEX16Q9Y5Y5 336 aa17.64■□□□□ 0.41
PTPRA-208ENST00000455631 SNTNA6NMZ2 147 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 YPEL1O60688 119 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 FADS2O95864 444 aaKnown RBP17.63■□□□□ 0.41
PTPRA-208ENST00000455631 CA2P00918 260 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 GPR176Q14439 515 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 SLC25A30Q5SVS4 291 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 GLDNQ6ZMI3 551 aaPredicted RBP17.63■□□□□ 0.41
PTPRA-208ENST00000455631 YPEL2Q96QA6 119 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 ZNF184Q99676 751 aaPredicted RBP17.63■□□□□ 0.41
PTPRA-208ENST00000455631 IFI27L2Q9H2X8 130 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 MBNL3Q9NUK0 354 aaKnown RBP17.63■□□□□ 0.41
PTPRA-208ENST00000455631 ERVK13-1Q9NX77 482 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 ADAM30Q9UKF2 790 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 OAZ3Q9UMX2 235 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 PCLOQ9Y6V0 5065 aa17.63■□□□□ 0.41
PTPRA-208ENST00000455631 UBE2QL1A1L167 161 aa17.62■□□□□ 0.41
PTPRA-208ENST00000455631 H7C2Y5 167 aa17.62■□□□□ 0.41
PTPRA-208ENST00000455631 CA11O75493 328 aa17.62■□□□□ 0.41
PTPRA-208ENST00000455631 TPPPO94811 219 aa17.62■□□□□ 0.41
PTPRA-208ENST00000455631 CSN3P07498 182 aa17.62■□□□□ 0.41
PTPRA-208ENST00000455631 GTF2A1P52655 376 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms