RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 HES4Q9HCC6 221 aa11.46□□□□□ -0.58
CLK3-203ENST00000454830 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.58
CLK3-203ENST00000454830 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.58
CLK3-203ENST00000454830 DOCK11Q5JSL3 2073 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 MED19A0JLT2 244 aaPredicted RBP11.45□□□□□ -0.58
CLK3-203ENST00000454830 GPR137BO60478 399 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 JTBO76095 146 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 IAPPP10997 89 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 ZNF616Q08AN1 781 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 OR2C3Q8N628 320 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 TMEM56Q96MV1 263 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 SLX1AQ9BQ83 275 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 TREM1Q9NP99 234 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
CLK3-203ENST00000454830 TMEM56-RWDD3S4R434 201 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 ADGRG4Q8IZF6 3080 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 MFSD2BA6NFX1 497 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 OR4A8P0C604 315 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 PTAFRP25105 342 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 HMGN3Q15651 99 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 Q3ZCU0 254 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 BVESQ8NE79 360 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 OR5D13Q8NGL4 314 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 TMEM231Q9H6L2 316 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 SRRM5B3KS81 715 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 CHST1O43916 411 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 NFYBP25208 207 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 NKX6-1P78426 367 aaPredicted RBP11.45□□□□□ -0.58
CLK3-203ENST00000454830 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 BOD1Q96IK1 185 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 DYNLRB1Q9NP97 96 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
CLK3-203ENST00000454830 RNF7Q9UBF6 113 aa11.45□□□□□ -0.58
CLK3-203ENST00000454830 CD200P41217 278 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 LPAR6P43657 344 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 SHEQ5VZ18 495 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 IGKV1D-17A0A075B6S4 117 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 VSTM5A8MXK1 200 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 LYL1P12980 280 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 STOML3Q8TAV4 291 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 AKAP6Q13023 2319 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 YLPM1P49750 1951 aaKnown RBP11.44□□□□□ -0.58
CLK3-203ENST00000454830 A0A0G2JRQ6 117 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 ODAMA1E959 279 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 DPRXA6NFQ7 191 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 MARC2Q969Z3 335 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 CCL13Q99616 98 aa11.44□□□□□ -0.58
CLK3-203ENST00000454830 RNF212BA8MTL3 300 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 IFNL4K9M1U5 179 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 IGHV1-46P01743 117 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 GYPAP02724 150 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 NDUFB7P17568 137 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 EWSR1Q01844 656 aaKnown RBP eCLIP11.43□□□□□ -0.583e-7■□□□□ 11.1
CLK3-203ENST00000454830 CATR1Q13166 79 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 REG4Q9BYZ8 158 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 NARFLQ9H6Q4 476 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 DCAF16Q9NXF7 216 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 A0A1W2PPE3 182 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 CRYZL1O95825 349 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 P2RY1P47900 373 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 LINC00205P59089 165 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 SPAG16Q8N0X2 631 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 OR4D5Q8NGN0 318 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 LEAP2Q969E1 77 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 AKR1E2Q96JD6 320 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 ELOVL5Q9NYP7 299 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 CLDN1O95832 211 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 LMO1P25800 156 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 HNF4GQ14541 408 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 CCL17Q92583 94 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 SLC25A31Q9H0C2 315 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 TLNRD1Q9H1K6 362 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 NGBQ9NPG2 151 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 AUP1Q9Y679 476 aa11.43□□□□□ -0.58
CLK3-203ENST00000454830 MGST3O14880 152 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 GPR12P47775 334 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 UCNP55089 124 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 GPR157Q5UAW9 335 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 DMBX1Q8NFW5 382 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 CCL21O00585 134 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 G6PCP35575 357 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 ID4P47928 161 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 CAMLGP49069 296 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 TLE1Q04724 770 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 TMEM267Q0VDI3 215 aaPredicted RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 PXDC1Q5TGL8 231 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 Q6ZRG5 221 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 OR5C1Q8NGR4 320 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 WFIKKN1Q96NZ8 548 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 MS4A7Q9GZW8 240 aaPredicted RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 GCM1Q9NP62 436 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 ACAA1P09110 424 aaPredicted RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 RPL23AP62750 156 aaKnown RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 DUX4L9Q6RFH8 374 aaPredicted RBP11.42□□□□□ -0.58
CLK3-203ENST00000454830 SSX9Q7RTT3 188 aa11.42□□□□□ -0.58
CLK3-203ENST00000454830 SNX22Q96L94 193 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms