RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GABRB1P18505 474 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 EDN2P20800 178 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 KCNJ3P48549 501 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ETV1P50549 477 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 INSL3P51460 131 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LINC00205P59089 165 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SNRPGP62308 76 aaKnown RBP4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CX3CL1P78423 397 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RUNX1Q01196 453 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMED1Q13445 227 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RIPK1Q13546 671 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PLGLAQ15195 96 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 AWAT2Q6E213 333 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SIGIRRQ6IA17 410 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ACSM6Q6P461 480 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 Q8N1Y9 231 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 STX19Q8N4C7 294 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CBR4Q8N4T8 237 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DRAXINQ8NBI3 349 aaPredicted RBP4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MINDY2Q8NBR6 621 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR10A7Q8NGE5 316 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR8H1Q8NGG4 311 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR6Q1Q8NGQ2 317 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 APH1BQ8WW43 257 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IL1F10Q8WWZ1 152 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RDH12Q96NR8 316 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR14A2Q96R54 314 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMED9Q9BVK6 235 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SELENOIQ9C0D9 397 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 METTL9Q9H1A3 318 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IFT22Q9H7X7 185 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PLEKHA3Q9HB20 300 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RHOFQ9HBH0 211 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IL36GQ9NZH8 169 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RCC2Q9P258 522 aaKnown RBP4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 EXOGQ9Y2C4 368 aaKnown RBP4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MRPS28Q9Y2Q9 187 aaKnown RBP4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HECTD4Q9Y4D8 3996 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 H3BNX3 289 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TXNL1O43396 289 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ORC5O43913 435 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RBMXL2O75526 392 aaKnown RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CRTAPO75718 401 aaPredicted RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CA2P00918 260 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FCGR1AP12314 374 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GTF2F2P13984 249 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MGMTP16455 207 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 BDKRB2P30411 391 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GBX2P52951 348 aaPredicted RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SYNJ2BPP57105 145 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 INSL4Q14641 139 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HAGHQ16775 308 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MPV17LQ2QL34 196 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MORN2Q502X0 79 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ACTBL2Q562R1 376 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NHLRC3Q5JS37 347 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C6orf183Q5T699 404 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DMKNQ6E0U4 476 aaPredicted RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR10K2Q6IF99 312 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 UNQ5815/PRO19632Q6UWF5 114 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GLIPR1L1Q6UWM5 242 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ASCL4Q6XD76 172 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SLC16A12Q6ZSM3 486 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF833PQ6ZTB9 187 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 KCTD20Q7Z5Y7 419 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ANKRD13BQ86YJ7 626 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SGPP2Q8IWX5 399 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SYS1Q8N2H4 156 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C8orf31Q8N9H6 132 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LFNGQ8NES3 379 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR52M1Q8NGK5 317 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MRPL30Q8TCC3 161 aaKnown RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GPR148Q8TDV2 347 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CPNE2Q96FN4 548 aaPredicted RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CENPNQ96H22 339 aaPredicted RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ABHD14BQ96IU4 210 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR4C12Q96R67 309 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CHCHD6Q9BRQ6 235 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HDHD3Q9BSH5 251 aaPredicted RBP4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NCOR1P1Q9H4R4 102 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TMEM138Q9NPI0 162 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR1A1Q9P1Q5 309 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CLEC2DQ9UHP7 191 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF580Q9UK33 172 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ORC6Q9Y5N6 252 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GMPPBQ9Y5P6 360 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PEX16Q9Y5Y5 336 aa4.58□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MCRIP1C9JLW8 97 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 H0YJW9 148 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 H7C2Y5 167 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RRHO14718 337 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ARPC1BO15143 372 aaKnown RBP4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HSPA12AO43301 675 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 JTBO76095 146 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NDUFA3O95167 84 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 BRI3O95415 125 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FADS2O95864 444 aaKnown RBP4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IGLV1-51P01701 117 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TRGV3P03979 118 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IGKV1-16P04430 117 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms