RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ITLN1Q8WWA0 313 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 GPR146Q96CH1 333 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 SNRNP40Q96DI7 357 aaKnown RBP9.88□□□□□ -0.83
VTA1-203ENST00000452973 PRELID1Q9Y255 219 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 BORCS7-ASMTA0A0B4J1R7 106 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 IGSF23A1L1A6 192 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 FHITP49789 147 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 EDDM3BP56851 147 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 SWI5Q1ZZU3 235 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 Q6ZRM9 215 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 MRPL37Q9BZE1 423 aaKnown RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 CACNG5Q9UF02 275 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 OOEPA6NGQ2 149 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 ATXN7O15265 892 aaPredicted RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 TMEM50AO95807 157 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 TUBG1P23258 451 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 LMO1P25800 156 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 GLRXP35754 106 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 ZNF616Q08AN1 781 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 EIF2S3LQ2VIR3 472 aaKnown RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 SHEQ5VZ18 495 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 ATRAIDQ6UW56 229 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 EIF4E3Q8N5X7 224 aaKnown RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 TMEM171Q8WVE6 324 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 ABHD14BQ96IU4 210 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 TUBG2Q9NRH3 451 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 IGKV1-39P01597 117 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 PRH1P02810 166 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 IGKV1D-39P04432 117 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 GPR157Q5UAW9 335 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 SLC35E4Q6ICL7 350 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 Q6ZRG5 221 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 ZCCHC24Q8N2G6 241 aaKnown RBP9.87□□□□□ -0.83
VTA1-203ENST00000452973 GCSAMQ8N6F7 178 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 TLNRD1Q9H1K6 362 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 PLEKHF2Q9H8W4 249 aa9.87□□□□□ -0.83
VTA1-203ENST00000452973 IGKV1D-17A0A075B6S4 117 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 ABCD4O14678 606 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 TSPAN4O14817 238 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 SELLP14151 372 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 MST1LQ2TV78 715 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 MEGF10Q96KG7 1140 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 CHD8Q9HCK8 2581 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 RAMP3O60896 148 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 KRASP01116 189 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 ACAA1P09110 424 aaPredicted RBP9.86□□□□□ -0.83
VTA1-203ENST00000452973 IAPPP10997 89 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 CD40P25942 277 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 CCKARP32238 428 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 SELENOVP59797 346 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 MZT1Q08AG7 82 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 FAM169BQ8N8A8 192 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 UBAC2Q8NBM4 344 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 OR5C1Q8NGR4 320 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 LRRC46Q96FV0 321 aa9.86□□□□□ -0.83
VTA1-203ENST00000452973 TPRP12270 2363 aaKnown RBP9.86□□□□□ -0.83
VTA1-203ENST00000452973 NPIPB11E5RHQ5 1161 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 ST8SIA5O15466 376 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 GAPDHP04406 335 aaKnown RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 CD80P33681 288 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 TDGF1P3P51864 188 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 NKX6-1P78426 367 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 ZNF585BQ52M93 769 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 PSG11Q9UQ72 335 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 C16orf97H3BN30 126 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 F12P00748 615 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 HOXD4P09016 255 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 TMEM267Q0VDI3 215 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 TGIF2LYQ8IUE0 185 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 FAM234AQ9H0X4 552 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 LIN7CQ9NUP9 197 aaKnown RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 DOCK11Q5JSL3 2073 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 NCOR2Q9Y618 2525 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 C1QTNF9BB2RNN3 333 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 SRRM5B3KS81 715 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 K7ENP7 123 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 CYB5R3P00387 301 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 IGKV1-5P01602 117 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 SULT1A2P50226 295 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 DYNLT3P51808 116 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 RPL30P62888 115 aaKnown RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 CCL8P80075 99 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 TNFAIP6P98066 277 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 ID3Q02535 119 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 TMEM182Q6ZP80 229 aaPredicted RBP9.85□□□□□ -0.83
VTA1-203ENST00000452973 TCTEX1D2Q8WW35 142 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 AKR1E2Q96JD6 320 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 GNG12Q9UBI6 72 aa9.85□□□□□ -0.83
VTA1-203ENST00000452973 C1orf174Q8IYL3 243 aa9.84□□□□□ -0.83
VTA1-203ENST00000452973 SMIM8Q96KF7 97 aa9.84□□□□□ -0.83
VTA1-203ENST00000452973 TSNAXQ99598 290 aaKnown RBP9.84□□□□□ -0.83
VTA1-203ENST00000452973 MMP26Q9NRE1 261 aa9.84□□□□□ -0.83
VTA1-203ENST00000452973 FAM212BQ9NTI7 297 aaPredicted RBP9.84□□□□□ -0.83
VTA1-203ENST00000452973 LYRM2Q9NU23 88 aaPredicted RBP9.84□□□□□ -0.83
VTA1-203ENST00000452973 COL6A6A6NMZ7 2263 aa9.84□□□□□ -0.83
VTA1-203ENST00000452973 F8W036 122 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms