RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 C6orf201Q7Z4U5 140 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 ZNF695Q8IW36 515 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 OR2AK2Q8NG84 335 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 OR6M1Q8NGM8 313 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 DPF1Q92782 380 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 CYYR1Q96J86 154 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 YPEL2Q96QA6 119 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 PLGRKTQ9HBL7 147 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 CHMP1AQ9HD42 196 aaPredicted RBP10.15□□□□□ -0.78
CHD3-206ENST00000452447 PLEKHJ1Q9NW61 149 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 STEAP1Q9UHE8 339 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 SLC22A1O15245 554 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 RGS10O43665 173 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 BPNT1O95861 308 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 BLVRBP30043 206 aaPredicted RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 F2RL1P55085 397 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 LSAMPQ13449 338 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 IRF3Q14653 427 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 MMDQ15546 238 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 TRAM1Q15629 374 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 CXorf66Q5JRM2 361 aaPredicted RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 ETV3LQ6ZN32 361 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 C18orf65Q6ZTR6 163 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 FAM71E2Q8N5Q1 922 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 IL1F10Q8WWZ1 152 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 NICN1Q9BSH3 213 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 MCRIP2Q9BUT9 160 aaKnown RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 TM2D1Q9BX74 207 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 CCDC90BQ9GZT6 254 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 ARL6IP5O75915 188 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 SLC2A2P11168 524 aaPredicted RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 ARSBP15848 533 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 VDAC1P21796 283 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 PSMA1P25786 263 aaKnown RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 MYCNOSP40205 109 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 UNC119Q13432 240 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 TPBGQ13641 420 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 SETD6Q8TBK2 473 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 HSPB9Q9BQS6 159 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 URM1Q9BTM9 101 aaKnown RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 KCNK15Q9H427 330 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 DUSP21Q9H596 190 aa10.14□□□□□ -0.79
CHD3-206ENST00000452447 ZNF107Q9UII5 783 aaPredicted RBP10.14□□□□□ -0.79
CHD3-206ENST00000452447 TMEM14DPA8MWL7 114 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
CHD3-206ENST00000452447 GABARAPL2P60520 117 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 ACTBP60709 375 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 FOXE3Q13461 319 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 HMGN3Q15651 99 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 MOB1BQ7L9L4 216 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 ODF3L1Q8IXM7 274 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 SVOPQ8N4V2 548 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 RBMXL1Q96E39 390 aaKnown RBP10.13□□□□□ -0.79
CHD3-206ENST00000452447 ZNF251Q9BRH9 671 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 MRPL20Q9BYC9 149 aaKnown RBP10.13□□□□□ -0.79
CHD3-206ENST00000452447 RIMS4Q9H426 269 aaPredicted RBP10.13□□□□□ -0.79
CHD3-206ENST00000452447 VCX3AQ9NNX9 186 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 ISYNA1Q9NPH2 558 aa10.13□□□□□ -0.79
CHD3-206ENST00000452447 AK6Q9Y3D8 172 aaKnown RBP10.13□□□□□ -0.79
CHD3-206ENST00000452447 CCL24O00175 119 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 MRPS14O60783 128 aaKnown RBP10.12□□□□□ -0.79
CHD3-206ENST00000452447 NAPSAO96009 420 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 ELANEP08246 267 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 OR5H8P0DN80 308 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 CD37P11049 281 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 HOXD3P31249 432 aaPredicted RBP10.12□□□□□ -0.79
CHD3-206ENST00000452447 RANBP1P43487 201 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 OR3A3P47888 321 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 RAB25P57735 213 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 RPS25P62851 125 aaKnown RBP10.12□□□□□ -0.79
CHD3-206ENST00000452447 QRFPP83859 136 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 MLLT11Q13015 90 aaPredicted RBP10.12□□□□□ -0.79
CHD3-206ENST00000452447 P2RY14Q15391 338 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 DEFB121Q5J5C9 76 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 TMEM91Q6ZNR0 172 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 ZNF833PQ6ZTB9 187 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 DUX3Q96PT4 197 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 P2RX4Q99571 388 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 PIPOXQ9P0Z9 390 aa10.12□□□□□ -0.79
CHD3-206ENST00000452447 SAA2-SAA4A0A096LPE2 208 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 SLC17A2O00624 439 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 RAB29O14966 203 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 SOCS1O15524 211 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 IGF1P05019 195 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 SAA2P0DJI9 122 aaPredicted RBP10.11□□□□□ -0.79
CHD3-206ENST00000452447 CPEP16870 476 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 CRHBPP24387 322 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
CHD3-206ENST00000452447 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 RAB11BQ15907 218 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 KCTD21Q4G0X4 260 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 LCNL1Q6ZST4 164 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 PRSS48Q7RTY5 328 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 OR8U1Q8NH10 309 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 MGLLQ99685 303 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 NABP2Q9BQ15 211 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 CHCHD6Q9BRQ6 235 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 LPAR5Q9H1C0 372 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms