RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DNM1P46Q6ZS02 220 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 COLCA1Q6ZS62 124 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SLC16A11Q8NCK7 471 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR52M1Q8NGK5 317 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR10G6Q8NH81 332 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 NT5CQ8TCD5 201 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PHIPQ8WWQ0 1821 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SIGLEC12Q96PQ1 595 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SPSB2Q99619 263 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 KLHDC3Q9BQ90 382 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TANC1Q9C0D5 1861 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TMEM222Q9H0R3 208 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SLC25A22Q9H936 323 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 NGBQ9NPG2 151 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 HEYLQ9NQ87 328 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 KLRF1Q9NZS2 232 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 BAZ2BQ9UIF8 2168 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 DUSP13Q9UII6 198 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PIGLQ9Y2B2 252 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CACNA1HO95180 2353 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LOC105371242A0A075B767 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SAA2-SAA4A0A096LPE2 208 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PPIAL4CA0A0B4J2A2 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 A0A1W2PPE3 182 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 FAM181BA6NEQ2 426 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 G3V4G9 280 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 H3BSH0 61 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 H3BVH4 76 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SPINT2O43291 252 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 FRS3O43559 492 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SERF1AO75920 110 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IL18BPO95998 194 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 FAM157CP0CG43 387 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PPIAL4GP0DN37 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PTGER4P35408 488 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 UCP2P55851 309 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TMEM50BP56557 158 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 HBBP68871 147 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RUNX1Q01196 453 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IBA57Q5T440 356 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 TCF24Q7RTU0 167 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MMD2Q8IY49 270 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OR9G1Q8NH87 305 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MYOZ3Q8TDC0 251 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RND1Q92730 232 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RPEQ96AT9 228 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CLDN23Q96B33 292 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SGK494Q96LW2 274 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GPR82Q96P67 336 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 HIST1H4GQ99525 98 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SLC25A33Q9BSK2 321 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PDFQ9HBH1 243 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 WSB2Q9NYS7 404 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 SIGLEC8Q9NYZ4 499 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GAGE12JA6NER3 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 KLRC4-KLRK1H3BQV0 150 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PLPP1O14494 284 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ATP5LO75964 103 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GAGE7O76087 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CST7O76096 145 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GAGE12FP0CL80 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GAGE12GP0CL81 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GAGE12IP0CL82 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IAPPP10997 89 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RPL7P18124 248 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 AZU1P20160 251 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CA7P43166 264 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GPR6P46095 362 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 RPL23P62829 140 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 GAGE4Q13068 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MFAP5Q13361 173 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TMEM187Q14656 261 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C5orf64Q2M2E5 130 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C2orf68Q2NKX9 166 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PLPP4Q5VZY2 271 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OLIG3Q7RTU3 272 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TMEM252Q8N6L7 170 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 LRTM2Q8N967 370 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OR4C13Q8NGP0 309 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 LYPD6BQ8NI32 183 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PPDPFLQ8WWR9 84 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ST8SIA1Q92185 356 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 DLX4Q92988 240 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 ZNF775Q96BV0 537 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 FAM173AQ9BQD7 235 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OSTCQ9NRP0 149 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IL36RNQ9UBH0 155 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 POLDIP2Q9Y2S7 368 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 KLF12Q9Y4X4 402 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 DENND4AQ7Z401 1863 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OOEPA6NGQ2 149 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C9JCJ5 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IFNL4K9M1U5 179 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ENSAO43768 121 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 PDCD6O75340 191 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 NEURL1O76050 574 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ACTL6BO94805 426 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SRSF3P84103 164 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 SIGLEC14Q08ET2 396 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TRA2AQ13595 282 aaKnown RBP eCLIP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms